WormBase Tree Display for Variation: WBVar00038196
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| WBVar00038196 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00038196 | |||
| Other_name | pas19236 | ||||
| cewivar00080016 | |||||
| Y57G7A.10.1:c.556C>T | |||||
| CE19639:p.Leu186= | |||||
| HGVSg | CHROMOSOME_II:g.1304892G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y57G7A | |
| Flanking_sequences | cggtaatttctctatattttttaaaaatttcttcattttttgcattaaaataatatattttcgttgaaaatttgtttttctgacatttttttgacggaaaactgacaattttcgattttttttcttcaaaaaaaaaagtagaaaaacgagaaaaaaccaatttccattgaaaatgtatttgggtctgctaaatatgaattgtagtttgtagcccccagcaggcccaaatttctccaattttccacacacatacttgagtatatctcaaatcggctaatcgtctgaaatacatggaattca | cggcgaaatgagcacacactcctccaggcaatgtaccgcctttgccacgtcattttcgagcaggaaaagctcgctgagctgaagccaagcttctgggtcgttcaggaaaatctgaaaattaataaattttagagttttttttttctagaaatcaaatgaaaaccttcaggtaatcgttgatagctcgaattgcgtcgagacgctttccctgagcgagaagaaccgcgacttttcgcttgcggaagctctgaaaattcaaattattagaaattttgcaaaaaaaaaatttcctgaattttt | |||
| Mapping_target | Y57G7A | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (44) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01435877 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00021973 | |||
| Transcript | Y57G7A.10.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y57G7A.10.1:c.556C>T | ||||
| HGVSp | CE19639:p.Leu186= | ||||
| cDNA_position | 573 | ||||
| CDS_position | 556 | ||||
| Protein_position | 186 | ||||
| Exon_number | 6/10 | ||||
| Codon_change | Ctg/Ttg | ||||
| Amino_acid_change | L | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
