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WormBase Tree Display for Variation: WBVar00036466

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Name Class

WBVar00036466EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00036466
Other_namepas18890
cewivar00079107
F47F6.1d.1:c.1568+118G>A
F47F6.1e.1:c.614+118G>A
F47F6.1a.1:c.497+118G>A
F47F6.1b.1:c.1397+118G>A
HGVSgCHROMOSOME_II:g.1235544C>T
Sequence_detailsSMapS_parentSequenceF47F6
Flanking_sequencescattatcagctacaaatttggaatttagcctgtgcctttaaaattaatatgagctgagttatagaccttcgaaaattgttgtcaaaaaaatttccggaaaatttttgccaaatttggaaagtacggcgttttgccaaaaatagggggatttttacgaaaatttgggttcaagtagagtttaatataaaaaattcaaattttattctataaattgctttttagcccgagaatttttgataacttctagaaaagttacagacattcgaaaatttctgccaaaaaatcttcctgagataatttgctggtacctagtttcgccaaaaatagcggaatttttacgaaaatttgggttccgatagaatttggcatggagaattcaaatttcttatttaaaaataactcagaaaattctctcacctgcaccaagtgtccttgtactcgtcttcaaatcgcttggtgtgcagtgtcagtgcttctcgggtcagtggcgtctgcggtgggtacttcctgaaaaaaaaattatttttttggtcaaatttatcggaatctgttgttgtttttgtttatggcaagtgtcatgcccgcgcgcgcgcatcctat
Mapping_targetF47F6
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (45)
LaboratoryQX
PersonWBPerson6900
WBPerson1730
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01435851
StatusLive
AffectsGeneWBGene00018572
TranscriptF47F6.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF47F6.1d.1:c.1568+118G>A
Intron_number8/9
F47F6.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF47F6.1a.1:c.497+118G>A
Intron_number4/6
F47F6.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF47F6.1b.1:c.1397+118G>A
Intron_number8/10
F47F6.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF47F6.1e.1:c.614+118G>A
Intron_number3/4
ReferenceWBPaper00040707
MethodWGS_Pasadena_Quinlan