WormBase Tree Display for Variation: WBVar00035001
expand all nodes | collapse all nodes | view schema
WBVar00035001 | Name | Public_name | WBVar00035001 | ||
---|---|---|---|---|---|
Other_name | pas18597 | ||||
cewivar00057127 | |||||
F41B4.4a.1:c.-28A>C | |||||
HGVSg | CHROMOSOME_X:g.6840643T>G | ||||
Sequence_details | SMap | S_parent | Sequence | C53B7 | |
Flanking_sequences | ctttttgtgttcaaatcttcgtgcgaatttttcagtgcaataaaggatgtgtgagtgataaagcaagctcctcgcgttttcacaatttgttcattgattcttggtactataatattcacggcggttcgtacagaatgctccaaatggtgactcgttattaatccttaaaattttttttgctgatgaaacccaatttgattgcctaccaatccgtattgatgatacacctgttcctaggaaagataatagtagaaatctgaagatgttgagcatttcaaatgcatttgttcagcaagttct | tcattttattcttaattggttgatgtgtagacgataattgaattgactgattttcccatagtgttgtcacaagcactaaaagaactttgattagtgggcgttgaaaaaagcaaaatacaaagttctagcagaaatttgaaagataaaaaaaaatgttaaattaaacatttaagaatatttttcaatgtctttttttaaaacttttattaaagctttttttaataaattaaaaaataaatgtcatatttttgttttaaaacatcgtactttttccagaagaaaacaatctgtacatttgca | |||
Mapping_target | C53B7 | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (26) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00001617 | |||
Transcript | F41B4.4a.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F41B4.4a.1:c.-28A>C | ||||
cDNA_position | 78 | ||||
Exon_number | 1/15 | ||||
Method | WGS_Pasadena_Quinlan |