WormBase Tree Display for Variation: WBVar00033441
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WBVar00033441 | Name | Public_name | WBVar00033441 | ||
---|---|---|---|---|---|
Other_name | pas18285 | ||||
snp_K04E7[3] | |||||
cewivar00056718 | |||||
K04E7.2.1:c.432-104T>C | |||||
HGVSg | CHROMOSOME_X:g.6458670T>C | ||||
Sequence_details | SMap | S_parent | Sequence | K04E7 | |
Flanking_sequences | gctataccacaccacttctcggatcaattgttgcggacggatacattggaaaattctggtatgtaataattgttgttttgcactcaataacgacttttcaggacaatcttctctgtctcaattctatacgcaatcggacaagtcgtgctcgctctcgcttctactaagaattttcaatcttcagttcacccgtaagtgatgcttgttccagtattcgacgcataaacttatcatgcaacttttccgtctttacgaattcctctcgattgaaacaaggcatgatgataagaacttcaaccg | ggcaacttttgcccgacagtgcacgcgccacattaaacattaaaaaactgaaaccgaacaaaattaaaaagggttcacaagaaataaactgctgaattttcagatggatggatctgtctggattactgatcattgcgttcggtaccggaggaatcaagccatgtgtgtctgcattcggaggagatcaattcgagttaggacaagaaagaatgctctcactcttcttttccatgttctacttttccatcaacgcaggatctatgatctctactttcatctctcccatcttcagatgtaaac | |||
Mapping_target | K04E7 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (163) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01469365 | |||
WBVar00245431 | |||||
Status | Live | ||||
Affects | Gene | WBGene00003877 | |||
Transcript | K04E7.2.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K04E7.2.1:c.432-104T>C | ||||
Intron_number | 5/15 | ||||
Reference | WBPaper00040707 | ||||
WBPaper00004703 | |||||
Method | WGS_Pasadena_Quinlan |