WormBase Tree Display for Variation: WBVar00032738
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| WBVar00032738 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00032738 | |||
| Other_name | haw37670 | ||||
| cewivar00192424 | |||||
| CE39403:p.Phe224= | |||||
| CE51680:p.Phe195= | |||||
| T12B5.6b.1:c.672C>T | |||||
| T12B5.6c.1:c.585C>T | |||||
| HGVSg | CHROMOSOME_III:g.933908G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | T12B5 | |
| Flanking_sequences | tgtaaatataaaagcatttgaaatg | aaaaaatggacaatggcattcgtac | |||
| Mapping_target | T12B5 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01389866 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00020453 | |||
| Transcript | T12B5.6c.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | T12B5.6c.1:c.585C>T | ||||
| HGVSp | CE51680:p.Phe195= | ||||
| cDNA_position | 603 | ||||
| CDS_position | 585 | ||||
| Protein_position | 195 | ||||
| Exon_number | 3/5 | ||||
| Codon_change | ttC/ttT | ||||
| Amino_acid_change | F | ||||
| T12B5.6b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | T12B5.6b.1:c.672C>T | ||||
| HGVSp | CE39403:p.Phe224= | ||||
| cDNA_position | 692 | ||||
| CDS_position | 672 | ||||
| Protein_position | 224 | ||||
| Exon_number | 3/5 | ||||
| Codon_change | ttC/ttT | ||||
| Amino_acid_change | F | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw37670 | ||||
| Method | WGS_Hawaiian_Waterston |
