WormBase Tree Display for Variation: WBVar00032226
expand all nodes | collapse all nodes | view schema
WBVar00032226 | Name | Public_name | WBVar00032226 | ||
---|---|---|---|---|---|
Other_name | pas18042 | ||||
cewivar00104284 | |||||
CE27323:p.Glu17= | |||||
Y71H2AR.1.1:c.51G>A | |||||
HGVSg | CHROMOSOME_III:g.2834713G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y71H2AM | |
Flanking_sequences | tttttcgataagaaattcctaaaaacactgaaaattttgggaaaattaaaatttttctttccaattttcagaaaaaaattttaaaatttgaattttggaatatggctcaaaaattttgtgcaaaagtgcagaaaaaaaaataaaatcctatcatttttcgggttttttaaaggattttcatgtctcttccgaatatttttttgttgaaaatttgtggtaaatttgaaaatttcatgaattttttctccagatgaccggactgaaacactacactgctcagggatacgaagcatttcagga | acactgaaatcgattggaaaaggaaaacgagtcgtcgctctgttcactggatccaaaattctgacaaccggagagtcttggtgcccggattgtgttgttggtacgagattttgatggcctacctacctgcctacctacccgcctagctcatcccctgcgtacctatctgctaacagcctctgccgcttctgtgcttacctactcacctatctacagtctacatgcctacctacggtgtgcctgcctttgcctaccgcatacctatgcctacctactgctcacctcacgcctgcctataaa | |||
Mapping_target | Y71H2AM | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00022188 | |||
Transcript | Y71H2AR.1.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y71H2AR.1.1:c.51G>A | ||||
HGVSp | CE27323:p.Glu17= | ||||
cDNA_position | 51 | ||||
CDS_position | 51 | ||||
Protein_position | 17 | ||||
Exon_number | 1/4 | ||||
Codon_change | gaG/gaA | ||||
Amino_acid_change | E | ||||
Method | WGS_Pasadena_Quinlan |