WormBase Tree Display for Variation: WBVar00028751
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| WBVar00028751 | Name | Public_name | WBVar00028751 | ||
|---|---|---|---|---|---|
| Other_name | pas17347 | ||||
| haw115804 | |||||
| cewivar00072296 | |||||
| Y54E10BR.7.1:c.1808-427C>T | |||||
| HGVSg | CHROMOSOME_I:g.3035873G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y54E10BR | |
| Flanking_sequences | atgtgacgtcagcacgttcttaaccgtgcaaaatcagttgagaagtctgcgtctcttctcccgcatttttatagatcaacgtagatcaaaccgaaataagacactctgacaccacatgattttttcatgatagcgcaaaaaatttcctctggttacggtagatttaaaggcgcatagctaacaaatatctttcgttgcgaggccatagcttaaaaaatttttgaattaaaaaaaaacatcaattttgtcttttattttagttttttcaagaaaaatatttcttgcgcgtgggggactggc | aaaaagagtctcgacacgagcattttttgttttctgaaaaggtgtgtgcctttgaagtgtactgttgtttcaaactctattacggaaacacaaaaatctgagaatgcgtatttcgcaacatatttgacgcgaaaaatatctcgtagcgaaaaccacggcccggcgaaagagacgtggccgcgagagctgcgccggctaggccaccgcctcctatggttaagatttttgaacgaataaacatttttaatttggctgctaagctcatttatctttgttttttctcgttttttctcattttta | |||
| Mapping_target | Y54E10BR | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (18) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00535669 | |||
| WBVar01341615 | |||||
| WBVar01280227 | |||||
| WBVar01421147 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003387 | |||
| Transcript | Y54E10BR.7.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y54E10BR.7.1:c.1808-427C>T | ||||
| Intron_number | 11/12 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
