WormBase Tree Display for Variation: WBVar00026606
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| WBVar00026606 | Name | Public_name | WBVar00026606 | ||
|---|---|---|---|---|---|
| Other_name | pas16918 | ||||
| cewivar00072230 | |||||
| Y71F9AL.18a.1:c.1443C>T | |||||
| CE25556:p.Leu481= | |||||
| Y71F9AL.18a.2:c.1443C>T | |||||
| HGVSg | CHROMOSOME_I:g.2921444G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y71F9AL | |
| Flanking_sequences | ataaaaaaattcgactacaccagctttaatttaaaaaaaaaagaattttgctcgcgccaaaatgagaactacacgaccaatcagtgatgtgctccacccaatattgaaccaatcgctgattggttgagcagttctcattttgggtggggaattcaaattttcgctttttttttcttctgctattcttgaatttccgactttttcggaggattttctgccaaaaactcactctctctgatcatccttcaacagttgaatcttataatacgaattcttattctgtgtaagatcagtaaacga | agtgtcgcctgatagagacttccatcaatctcatttttgaatacatgacaacgatcggccagtgcgaatttcgcatcaacaactgttccttttttaataatatgagtattggttgatgtgagatcgccgacttttatcggaacattgttagtcgaatcgaatgcttcagccgcataaatgaattgttcaccacgagtaccacctttcgactttcttttatcaattttcactacagattctccatcctcttctcctatataaagtcgttcactcatttgattgaatacaatatcttgaagc | |||
| Mapping_target | Y71F9AL | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (49) | |||||
| Laboratory | QX | ||||
| AX | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01430835 | |||
| WBVar01279986 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004049 | |||
| Transcript | Y71F9AL.18a.2 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y71F9AL.18a.2:c.1443C>T | ||||
| HGVSp | CE25556:p.Leu481= | ||||
| cDNA_position | 1574 | ||||
| CDS_position | 1443 | ||||
| Protein_position | 481 | ||||
| Exon_number | 6/13 | ||||
| Codon_change | ctC/ctT | ||||
| Amino_acid_change | L | ||||
| Y71F9AL.18a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y71F9AL.18a.1:c.1443C>T | ||||
| HGVSp | CE25556:p.Leu481= | ||||
| cDNA_position | 1462 | ||||
| CDS_position | 1443 | ||||
| Protein_position | 481 | ||||
| Exon_number | 5/12 | ||||
| Codon_change | ctC/ctT | ||||
| Amino_acid_change | L | ||||
| Reference | WBPaper00040707 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
