WormBase Tree Display for Variation: WBVar00024960
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WBVar00024960 | Name | Public_name | WBVar00024960 | |||
---|---|---|---|---|---|---|
Other_name | haw86090 | |||||
cewivar00247241 | ||||||
CE52996:p.Thr191Lys | ||||||
T26E4.8.1:c.572C>A | ||||||
HGVSg | CHROMOSOME_V:g.15797008C>A | |||||
Sequence_details | SMap | S_parent | Sequence | T26E4 | ||
Flanking_sequences | cggattaaatatagattggttgtaa | gttctttgagcttcatattacaaac | ||||
Mapping_target | T26E4 | |||||
Type_of_mutation | Substitution | C | A | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Hawaiian_Waterston | ||||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||
Laboratory | RW | |||||
Person | WBPerson1562 | |||||
Analysis | WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | ||||||
Status | Live | |||||
Affects | Gene | WBGene00012050 | ||||
Transcript | T26E4.8.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 1 | tolerated | ||||
PolyPhen | 0.003 | benign | ||||
HGVSc | T26E4.8.1:c.572C>A | |||||
HGVSp | CE52996:p.Thr191Lys | |||||
cDNA_position | 572 | |||||
CDS_position | 572 | |||||
Protein_position | 191 | |||||
Exon_number | 2/4 | |||||
Codon_change | aCg/aAg | |||||
Amino_acid_change | T/K | |||||
Remark | [20081124 db] this Variation was previously named hw86090 | |||||
Method | WGS_Hawaiian_Waterston |