Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00022023

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00022023EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00022023
Other_namehaw35527
cewivar00145805
Y46E12BL.4a.1:c.50-477C>A
Y46E12BL.4e.1:c.233-477C>A
Y46E12BL.4h.1:c.395-477C>A
Y46E12BL.4f.1:c.50-477C>A
Y46E12BL.4g.1:c.233-477C>A
Y46E12BL.4i.1:c.185-477C>A
Y46E12BL.4b.1:c.50-477C>A
Y46E12BL.4c.1:c.395-477C>A
HGVSgCHROMOSOME_II:g.15219715C>A
Sequence_detailsSMapS_parentSequenceY46E12BL
Flanking_sequencestccgaaaggtctcgaaacgaatcaaaattgtttgcgagtctttttttcag
Mapping_targetY46E12BL
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01386527
StatusLive
AffectsGeneWBGene00021597
TranscriptY46E12BL.4h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4h.1:c.395-477C>A
Intron_number1/5
Y46E12BL.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4f.1:c.50-477C>A
Intron_number1/5
Y46E12BL.4i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4i.1:c.185-477C>A
Intron_number3/7
Y46E12BL.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4c.1:c.395-477C>A
Intron_number2/7
Y46E12BL.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4b.1:c.50-477C>A
Intron_number1/6
Y46E12BL.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4e.1:c.233-477C>A
Intron_number1/5
Y46E12BL.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4a.1:c.50-477C>A
Intron_number1/4
Y46E12BL.4g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4g.1:c.233-477C>A
Intron_number1/5
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw35527
MethodWGS_Hawaiian_Waterston