WormBase Tree Display for Variation: WBVar00021826
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| WBVar00021826 | Name | Public_name | WBVar00021826 | ||
|---|---|---|---|---|---|
| Other_name | pas15962 | ||||
| cewivar00019604 | |||||
| Y92C3B.3b.2:c.1-22C>A | |||||
| HGVSg | CHROMOSOME_III:g.1080503G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y92C3B | |
| Flanking_sequences | aatccacgcctaaaaaacaataaatttagggtttttttggcctaaaaatcaaaaaatccaaaaatccctggaatttccacgaacctatcgttgcagcctgctcaggatcgaagacatcgtccacgaatcgtagcattaagctgaaaatttttgaatttaaattgatttttttaaattttttttgggcgagaaaacccctcacctcgacttccctacgccactttcgccgataatcaggattttgagagttgtgagggggcttgaactgtcgtcggacatctggaattcgtaaaaacgaag | gaaaatgcaggataattttttttttgttgggaaatttacgtttttaaggataaaagataaaaaactcgatttttcagggtattttccccattttaagttaattttttaacacttttaaatagatttttcaccttaaaacccaaaaatttgccgaaaaatcaataaatttcccttcgaaaatgtcagatgtcgttgcacgagacgctctttcggaaaagagagcgatggagcgcacttgcacttggcacgatgccaagtgcctgtcgtggtgagacccgatggcgcgaaaatggatttgtt | |||
| Mapping_target | Y92C3B | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (96) | |||||
| Laboratory | QX | ||||
| AX | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01323551 | |||
| WBVar01443449 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004277 | |||
| Transcript | Y92C3B.3b.2 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y92C3B.3b.2:c.1-22C>A | ||||
| Intron_number | 1/5 | ||||
| Reference | WBPaper00040707 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
