WormBase Tree Display for Variation: WBVar00021766
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| WBVar00021766 | Name | Public_name | WBVar00021766 | ||
|---|---|---|---|---|---|
| Other_name | pas15950 | ||||
| haw38152 | |||||
| haw139966 | |||||
| Y92C3B.3b.2:c.*883A>G | |||||
| Y92C3B.3a.2:c.*883A>G | |||||
| HGVSg | CHROMOSOME_III:g.1078799T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | Y92C3B | |
| Flanking_sequences | tgaaaaaccagcgattttaggtcaaaattgacattttacatgaaaaaagggcctaatttaggtaaaaatcgataaattttgcgtggaaaatagctattttaagtgaaaatcgatgaattttacacggaaaaacgacaattttgggggaaaattggcgattttaggccaaaatttgcatttttgctcggaaaaatggctaatttaggtgaaaatcgataaatgttacatgaaaattggaaattttgagccgaaattggtaattttacatggaaaacagcgattttgggggaaaattgtcgt | tttacatggaaaaaatggcatttttacatgaaaaagtgtggcaattttaagccaaaattggtatttttgtatggaaaatagcttttttagatgaaaatcgataaattttgcacgaaaaacggcgatttttgagaaaaattgacatttttacatgaaaaagtggcaattttaagccaaaatcgacatttcctcatggaaaatagctattttaggtgaaaatcgataaattttgaatgaaaaacggggatttcaggtgaaaattggcaatttcaagtcaaaattgacatttttacagggaaa | |||
| Mapping_target | Y92C3B | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00006642 | From_analysis | WGS_De_Bono | |||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar01323546 | |||
| WBVar00035148 | |||||
| WBVar01256146 | |||||
| WBVar00559831 | |||||
| WBVar01390545 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004277 | |||
| Transcript | Y92C3B.3b.2 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y92C3B.3b.2:c.*883A>G | ||||
| cDNA_position | 1636 | ||||
| Exon_number | 6/6 | ||||
| Y92C3B.3a.2 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y92C3B.3a.2:c.*883A>G | ||||
| cDNA_position | 1548 | ||||
| Exon_number | 5/5 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
