WormBase Tree Display for Variation: WBVar00018965
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| WBVar00018965 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00018965 | |||
| Other_name | haw84891 | ||||
| haw171460 | |||||
| cewivar00245074 | |||||
| Y75B12B.1a.2:c.*129C>G | |||||
| Y75B12B.1a.1:c.*88-3C>G | |||||
| Y75B12B.1a.3:c.*88-3C>G | |||||
| Y75B12B.1c.1:c.557-3C>G | |||||
| HGVSg | CHROMOSOME_V:g.15185446C>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y75B12B | |
| Flanking_sequences | gaatgccctaataattgagaatttc | agaaatacttgcaaatttatgatga | |||
| Mapping_target | Y75B12B | ||||
| Type_of_mutation | Substitution | C | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00591325 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00013567 | |||
| Transcript | Y75B12B.1a.3 | VEP_consequence | splice_region_variant,intron_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y75B12B.1a.3:c.*88-3C>G | ||||
| Intron_number | 4/4 | ||||
| Y75B12B.1a.1 | VEP_consequence | splice_region_variant,intron_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y75B12B.1a.1:c.*88-3C>G | ||||
| Intron_number | 4/5 | ||||
| Y75B12B.1c.1 | VEP_consequence | splice_region_variant,intron_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y75B12B.1c.1:c.557-3C>G | ||||
| Intron_number | 4/6 | ||||
| Y75B12B.1a.2 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y75B12B.1a.2:c.*129C>G | ||||
| cDNA_position | 703 | ||||
| Exon_number | 4/5 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw84891 | ||||
| Method | WGS_Hawaiian_Waterston |
