WormBase Tree Display for Variation: WBVar00018783
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| WBVar00018783 | Name | Public_name | WBVar00018783 | ||
|---|---|---|---|---|---|
| Other_name | haw34879 | ||||
| haw137496 | |||||
| cewivar00189398 | |||||
| CE38092:p.Asp1147= | |||||
| R05H10.6.1:c.3441C>T | |||||
| HGVSg | CHROMOSOME_II:g.14849781C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | R05H10 | |
| Flanking_sequences | gagtgtatgtccatgactccagtga | ctcttaagccttgagctaccgtact | |||
| Mapping_target | R05H10 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00557361 | |||
| WBVar01385519 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000399 | |||
| Transcript | R05H10.6.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | R05H10.6.1:c.3441C>T | ||||
| HGVSp | CE38092:p.Asp1147= | ||||
| cDNA_position | 3540 | ||||
| CDS_position | 3441 | ||||
| Protein_position | 1147 | ||||
| Exon_number | 10/12 | ||||
| Codon_change | gaC/gaT | ||||
| Amino_acid_change | D | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw34879 | ||||
| Method | WGS_Hawaiian_Waterston |
