WormBase Tree Display for Variation: WBVar00015340
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WBVar00015340 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00015340 | |||
Other_name | haw84166 | ||||
haw170991 | |||||
cewivar00244165 | |||||
ZC376.7c.1:c.495+350A>T | |||||
ZC376.7b.2:c.495+350A>T | |||||
ZC376.7b.1:c.495+350A>T | |||||
ZC376.7a.1:c.543+350A>T | |||||
ZC376.7c.2:c.495+350A>T | |||||
ZC376.7a.2:c.543+350A>T | |||||
HGVSg | CHROMOSOME_V:g.14195478A>T | ||||
Sequence_details | SMap | S_parent | Sequence | ZC376 | |
Flanking_sequences | aatttccggctgctggaagttaaca | aattggagaattaaaggtgcagtaa | |||
Mapping_target | ZC376 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00590856 | |||
Status | Live | ||||
Affects | Gene | WBGene00013878 | |||
Transcript | ZC376.7c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZC376.7c.1:c.495+350A>T | ||||
Intron_number | 5/9 | ||||
ZC376.7a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC376.7a.2:c.543+350A>T | ||||
Intron_number | 5/9 | ||||
ZC376.7b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC376.7b.2:c.495+350A>T | ||||
Intron_number | 6/10 | ||||
ZC376.7a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC376.7a.1:c.543+350A>T | ||||
Intron_number | 4/8 | ||||
ZC376.7c.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC376.7c.2:c.495+350A>T | ||||
Intron_number | 6/10 | ||||
ZC376.7b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC376.7b.1:c.495+350A>T | ||||
Intron_number | 5/9 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw84166 | ||||
Method | WGS_Hawaiian_Waterston |