WormBase Tree Display for Variation: WBVar00014269

WBVar00014269 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00014269
    Other_name: cbs12727
      cb12727 Paper_evidence: WBPaper00055507
    HGVSg: chrV:g.17473069T>C
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc4109
    Flanking_sequences: aatgcgctctattgataattggtct taacttgccaaaaactgatcatcaa
    Mapping_target: cb25.fpc4109
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: GTNAC MaeIII 745 151 55 49
      Polymorphic_strain_digest: GTNAC MaeIII 501 244 151 55 49
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00037974
    Transcript: CBG18584a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG18584a.1:c.574-598A>G
        Intron_number: 5/14
      CBG18584b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG18584b.1:c.574-598A>G
        Intron_number: 5/14
      CBG18584c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG18584c.1:c.574-598A>G
        Intron_number: 5/13
      CBG18584d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG18584d.1:c.574-598A>G
        Intron_number: 5/15
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP