WormBase Tree Display for Variation: WBVar00012906
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WBVar00012906 | Name (3) | ||||
---|---|---|---|---|---|
Sequence_details | SMap | S_parent | Sequence | T07D3 | |
Flanking_sequences | tgccagtgagttactgtagggggtactgtacaagatactgtagggggtagggtacgatagaggtactgtggggtaactataaggttactgtacaagatcttgtgagggtactgtagacgtactgtaaatttcaattttgtcaaattccagccgacggcaccaaatacaagttcacctaccctatctacgatccttggtgtgcagcggatcttcacggtcatattttctgggtctcctgtaatccactggagaaaattttggtaacttttttcagggaagtttttgattaatcttcgaatt | ccaggcagagtatggagaagactggaaaaaggatcacctctcatccgagtacagatggaattattcgcagaaaaatgtgcaaacaaacgggaaatatacagcggagcagatgaagatgctttatagaaaggctacaatcgggttccgtgctgtacacagagctttaaactcatttatttctaggattcctattttataaaatgaataaattttttggaagcagcggacattttacgggtctcagcaagcacttaaaaaatatcagagagcagcggacgtcctacgggtttcagaaagcag | |||
Mapping_target | T07D3 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00020307 | |||
Transcript | T07D3.4b.1 | VEP_consequence | splice_region_variant,intron_variant | ||
VEP_impact | LOW | ||||
HGVSc | T07D3.4b.1:c.481-5T>C | ||||
Intron_number | 3/3 | ||||
T07D3.4a.1 | VEP_consequence | splice_region_variant,intron_variant | |||
VEP_impact | LOW | ||||
HGVSc | T07D3.4a.1:c.1036-5T>C | ||||
Intron_number | 9/10 | ||||
Method | WGS_Pasadena_Quinlan |