WormBase Tree Display for Variation: WBVar00012526
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| WBVar00012526 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00012526 | |||
| Other_name | pas14102 | ||||
| cewivar00115295 | |||||
| C14A11.3b.1:c.1044T>C | |||||
| CE47800:p.Asp348= | |||||
| HGVSg | CHROMOSOME_X:g.2781555T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F55F1 | |
| Flanking_sequences | atactatctgttagaaatctcataacaagtaaaaaaaaaacgtaaaaacccgcagctggcatgcagtgtgcttgacaggaaaccctgctgcgcaaataaacgattagaaaattatcgaaattccatttctgtttattcatctctttagacaaaacaggccaaaaaaaattatctgaaggagctgtttgtatttatgattaatgagccagtggcaagcgcaagcgcatgtaatttacaggaagaattcaaaattgctgtccgaaagggcttcaccttgctcaagtccgtcaggcagctgga | aagaagccgacacctgaacaactatcgccgactcggctccataatgtgacggcaattgagcgaatgctggttcaattgggtacgtacttaatgagtgatgtcattagtagatcgtaaaattgagaataaggaaatcgagcggatgagataagaggcaaaagttctggcaaggaagcaagaaaattttgagggaaaaattacatagtttttaggaaatgttgagagaaaagtaaggggaatttgaattaaattatggaaaatggaccgacaataattgtggggcaactataacgttttctc | |||
| Mapping_target | F55F1 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (89) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01468048 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00006496 | |||
| Transcript | C14A11.3b.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C14A11.3b.1:c.1044T>C | ||||
| HGVSp | CE47800:p.Asp348= | ||||
| cDNA_position | 1080 | ||||
| CDS_position | 1044 | ||||
| Protein_position | 348 | ||||
| Exon_number | 11/24 | ||||
| Codon_change | gaT/gaC | ||||
| Amino_acid_change | D | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
