WormBase Tree Display for Variation: WBVar00010946
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| WBVar00010946 | Name | Public_name | WBVar00010946 | ||
|---|---|---|---|---|---|
| Other_name | pas13786 | ||||
| haw16637 | |||||
| haw124053 | |||||
| cewivar00076874 | |||||
| K07E8.3.2:c.345G>A | |||||
| K07E8.3.1:c.345G>A | |||||
| CE29512:p.Pro115= | |||||
| HGVSg | CHROMOSOME_II:g.659187G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | K07E8 | |
| Flanking_sequences | agatcaactcaagttgggccaggtcagtttattgtgatgactttgcaactgttcagattttcagccttgttatgtacgtggtggaagagttgattatcatgacaaaagatatccaaatcgcacaggccacgattgtgtgatcttcaacaataatatagcagaagtaagtgagaaaacaacataattgtggcaaatcattgacttttcagatccagattacaaccgtcggtttgttttttatatacggtagggtctttgaaaaaacttccaatacatttcagctacaaactttgtaactcc | attgcaacactcaatgctcccaagattatttataaggttcatggaatgataacacagcggggcaaatattccaaaaaagaagttttttgttttgttataactgatgacaaaggagactctgttaatgttgctgcattctgcgaatttgctgattggctatacgagaatcttaaggagaagcaggtgagaagttgcttttggaaagaattcgattgaaaactatataaaaggaattggttaaaattgcagtggtattacttatactgtggacttattgaaaaagtatgcaaaccagacgac | |||
| Mapping_target | K07E8 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (12) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar01358334 | |||
| WBVar00163387 | |||||
| WBVar00543918 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00019495 | |||
| Transcript | K07E8.3.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | K07E8.3.1:c.345G>A | ||||
| HGVSp | CE29512:p.Pro115= | ||||
| cDNA_position | 378 | ||||
| CDS_position | 345 | ||||
| Protein_position | 115 | ||||
| Exon_number | 5/8 | ||||
| Codon_change | ccG/ccA | ||||
| Amino_acid_change | P | ||||
| K07E8.3.2 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | K07E8.3.2:c.345G>A | ||||
| HGVSp | CE29512:p.Pro115= | ||||
| cDNA_position | 378 | ||||
| CDS_position | 345 | ||||
| Protein_position | 115 | ||||
| Exon_number | 5/8 | ||||
| Codon_change | ccG/ccA | ||||
| Amino_acid_change | P | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
