WormBase Tree Display for Variation: WBVar00010181
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WBVar00010181 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00010181 | |||
Other_name | pas13633 | ||||
haw16533 | |||||
cewivar00076462 | |||||
C09E8.3.1:c.999+33C>T | |||||
HGVSg | CHROMOSOME_II:g.549248C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C09E8 | |
Flanking_sequences | tgctgagtagcgactcaaacaacctaactatataacaaatgttccaaattttcaggcagagatggaagacgagaacaatgaaatcgcaaaacttatgcgcaagaaggaagccgacgagatccgtgttccactgaaattcctgagaaaagctgtgaagacagctctgatgctcggcggccaaaatgtgacggatttcgatcaaaaaacgctgaaaatggtctcaccacgaatgatgtcgattgttccagagcaggaggatgagagtttggttggttttttcaaaattatggaatctaaaaa | agctcaaaatgctccacggttgctcattttttggctgagaaacatttttttaaaggcttcaaattttctgaaacattaagaacctctaaaaattttctaatttttttacaatcaattgagataaggcaaaattagtcaagtttctaaatttcagtttcgatttttggagcatttttagtttttgacatgctcgaacctgtttgaaaactgccaaaaattacaaaaattcatttccggacaattttagtcaaattttaattttttgcagttttaaccacaaatctcccagtacaaagtaca | |||
Mapping_target | C09E8 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||
Million_mutation_project_reanalysis | |||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | AX | ||||
RW | |||||
Person | WBPerson6900 | ||||
WBPerson1562 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Hawaiian_Waterston | |||||
History | Acquires_merge | WBVar00163283 | |||
WBVar01358137 | |||||
WBVar01292071 | |||||
Status | Live | ||||
Affects | Gene | WBGene00015646 | |||
Transcript | C09E8.3.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C09E8.3.1:c.999+33C>T | ||||
Intron_number | 5/9 | ||||
Reference | WBPaper00037807 | ||||
Method | WGS_Pasadena_Quinlan |