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WormBase Tree Display for Variation: WBVar00009146

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Name Class

WBVar00009146NamePublic_nameWBVar00009146
Other_namepas13426
cewivar00075953
B0432.5a.1:c.46-390C>T
B0432.5b.1:c.-555C>T
Y43H11AL.3a.2:c.-12-3064G>A
HGVSgCHROMOSOME_II:g.258258C>T
Sequence_detailsSMapS_parentSequenceB0432
Flanking_sequencesttgaaaaatagaatttccgtgatttttctgatattttgacctcgaaaacaatgttctttgtgttgtattctcagacaacctcatcaacacacactttttataatatctatagtaaaaaagaatagtatgagaagtcgaacagttaatgtgttattcaagtggaatgtgtgtatatatattctaggaagttttcatgaaaattttcaaattttagtgttttctttgagttttggcacattataacgcattaccaactaatttttcatacgctaacattctaaataatgtttgaaagtaccttacaaaacgtacatactaactaaattgagtcacgtaacactgcaattactattgatttactaaaacaatcactgtgttcactttcatatgctgggttatcagttctcggccaataactttctcaatacccgtctaaccatctacagtaacccttcagaagtgtcgtctccattgtcaaaactaattgcggcggtgaacgtcgcaaggaacgtctcaattaacatgtcgtcactaaccaacaatactttcatggtaacttagaattaacaccctaagtgatcattttgaaaatccgacctt
Mapping_targetB0432
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004599From_analysisMillion_mutation_project_reanalysis
WBStrain00004604From_analysisWGS_Pasadena_Quinlan
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00004166
WBGene00000296
TranscriptY43H11AL.3a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43H11AL.3a.2:c.-12-3064G>A
Intron_number1/28
B0432.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0432.5a.1:c.46-390C>T
Intron_number1/8
B0432.5b.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScB0432.5b.1:c.-555C>T
cDNA_position362
Exon_number1/9
MethodWGS_Pasadena_Quinlan