WormBase Tree Display for Variation: WBVar00006006
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WBVar00006006 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00006006 | |||
Other_name | pas12798 | ||||
cewivar00017635 | |||||
C24A1.2b.1:c.162+7377G>T | |||||
HGVSg | CHROMOSOME_III:g.696707G>T | ||||
Sequence_details | SMap | S_parent | Sequence | C24A1 | |
Flanking_sequences | agcggtaggagtgtgggaatgctcctgccgggaaggagtttgccgtctgcatctcttccaccttgcactctctcactatctcttttttttctgagtgtgtctgtgtcgcgagagctcttgttagatgtgtgattgtagtgtgtgtaagattttcagagggtggattgtaaaaaataaaaaattaaaataaaaattaaaattttgcaataagaatatcttcataaaaaatgaattccgagtttttgtaaaaaaatttcagaaacctttgcaaattgaaagaaagtgatttaggattaaatg | taggtgtttgttgttcacgattgcctgcctacctgtctacctagttttttctgagtcttgacgtgatcttcggatcataagagtaaatctgcaaattttattgaagttaaaaagatatcaaaatgtttagaaaaacaaacaaattaactaaattcggaaaattcggcaatttgctgagctcctcaaacgtcaaattcgacaaatgcggcaaatttaccaagcttgtcaaacggctaattcggcaaatttgctggagacccctggtgtccactaccgtctgataatgaaaattctctatga | |||
Mapping_target | C24A1 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (81) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01443202 | |||
Status | Live | ||||
Affects | Gene | WBGene00016029 | |||
Transcript | C24A1.2b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C24A1.2b.1:c.162+7377G>T | ||||
Intron_number | 1/6 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |