WormBase Tree Display for Variation: WBVar00001786
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WBVar00001786 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00001786 | |||
Other_name | pas11954 | ||||
cewivar00102026 | |||||
R03C1.3b.1:c.193-47C>T | |||||
R03C1.3a.1:c.643-47C>T | |||||
HGVSg | CHROMOSOME_II:g.14906964C>T | ||||
Sequence_details | SMap | S_parent | Sequence | R03C1 | |
Flanking_sequences | ttagagtatttatgttaacagatccttgcaaaagtaacgcagatccttgcaaaagtaacgcagatccttgcaaaaattgcactaaccaaaattcactaaattaacataaaatcctacagtaccccaagtaacttgaaagttacagtacctctacagcacccatataagtctaacttcatttaaactacagtagtactataaactattttctaaaactacagtagcccatagattacttacttgattaaaaaaattgtatgtgcttttacagtactcccataaattgaaaatctcttaaaa | tacagtaccccaaacctagctctaaaaataatttccctgcttccaggtgtggttccaaaaccgtcgtacaaaatggcgcaagaaggaagcggccgacaatgcactggtcaaacgtggtgccagcggcgacaagtctccttgctcactgagcccatttctcagcgctggaatttagcttttaagcgttctacctctccccctcccttcaaccgagtgtattattcccccaatttgtttgcaattttttcctgaagccctttaagaaaatccaaaatcatgaccttcttccgtctttacacc | |||
Mapping_target | R03C1 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (21) | |||||
Laboratory | AX | ||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01253953 | |||
Status | Live | ||||
Affects | Gene | WBGene00000584 | |||
Transcript | R03C1.3b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R03C1.3b.1:c.193-47C>T | ||||
Intron_number | 3/4 | ||||
R03C1.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R03C1.3a.1:c.643-47C>T | ||||
Intron_number | 4/5 | ||||
Reference | WBPaper00037807 | ||||
Method | WGS_Pasadena_Quinlan |