WormBase Tree Display for Variation: WBVar00001513
expand all nodes | collapse all nodes | view schema
WBVar00001513 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00001513 | |||
Other_name | haw31425 | ||||
cewivar00015450 | |||||
Y38E10A.22a.1:c.703+416G>A | |||||
Y38E10A.22b.1:c.334+416G>A | |||||
HGVSg | CHROMOSOME_II:g.12675440C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y38E10A | |
Flanking_sequences | gactttttaacaaatattctgcatt | atcttgtttttaaagattcaatttc | |||
Mapping_target | Y38E10A | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin (7) | |||||
Affects | Gene | WBGene00012600 | |||
Transcript | Y38E10A.22b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y38E10A.22b.1:c.334+416G>A | ||||
Intron_number | 1/2 | ||||
Y38E10A.22a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y38E10A.22a.1:c.703+416G>A | ||||
Intron_number | 4/6 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw31425 | ||||
Method | WGS_Hawaiian_Waterston |