WormBase Tree Display for Variation: WBVar00000486
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| WBVar00000486 | Evidence | Paper_evidence | WBPaper00004323 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | bn84 | |||||
| Other_name | CE28237:p.Glu787Ter | ||||||
| F54F7.5.1:c.2359G>T | |||||||
| HGVSg | CHROMOSOME_X:g.11861175G>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | F54F7 | |||
| Flanking_sequences | actcaacatccttttgataaactctctact | aagctgacgagaataactctaagaaggtga | |||||
| Mapping_target | F54F7 | ||||||
| Type_of_mutation | Substitution | g | t | Paper_evidence | WBPaper00004323 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | SS | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00003219 | |||||
| Transcript | F54F7.5.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F54F7.5.1:c.2359G>T | ||||||
| HGVSp | CE28237:p.Glu787Ter | ||||||
| cDNA_position | 2382 | ||||||
| CDS_position | 2359 | ||||||
| Protein_position | 787 | ||||||
| Exon_number | 12/14 | ||||||
| Codon_change | Gaa/Taa | ||||||
| Amino_acid_change | E/* | ||||||
| Genetics | Interpolated_map_position | X | 6.7386 | ||||
| Mapping_data | In_multi_point | 2170 | |||||
| 2173 | |||||||
| Reference | WBPaper00004323 | ||||||
| Method | Substitution_allele |
