WormBase Tree Display for Variation: WBVar00000240
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| WBVar00000240 | Evidence | Paper_evidence | WBPaper00005695 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | ar224 | |||||
| Other_name | F02A9.6.1:c.2185G>A | ||||||
| CE00237:p.Ala729Thr | |||||||
| HGVSg | CHROMOSOME_III:g.9097121G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | F02A9 | |||
| Flanking_sequences | acagcgcaaagtgtcgttgatttgattgct | ctggacttgtgaagtctgatgtaagttatt | |||||
| Mapping_target | F02A9 | ||||||
| Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00005695 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00052667 | ||||||
| Laboratory | GS | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00001609 | |||||
| Transcript | F02A9.6.1 | VEP_consequence | missense_variant | ||||
| VEP_impact | MODERATE | ||||||
| SIFT | 0.01 | deleterious | |||||
| PolyPhen | 0.999 | probably_damaging | |||||
| HGVSc | F02A9.6.1:c.2185G>A | ||||||
| HGVSp | CE00237:p.Ala729Thr | ||||||
| cDNA_position | 2257 | ||||||
| CDS_position | 2185 | ||||||
| Protein_position | 729 | ||||||
| Exon_number | 7/11 | ||||||
| Codon_change | Gct/Act | ||||||
| Amino_acid_change | A/T | ||||||
| Genetics | Interpolated_map_position | III | 0.163857 | ||||
| Reference | WBPaper00005695 | ||||||
| WBPaper00061946 | |||||||
| Remark | A729T, extracellular domain | ||||||
| Method | Substitution_allele |
