WormBase Tree Display for Variation: WBVar01752379
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WBVar01752379 | Name | Public_name | WBVar01752379 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00451954 | |||||||
CE24523:p.Glu115Asp | ||||||||
Y60A3A.18.1:c.345A>C | ||||||||
HGVSg | CHROMOSOME_V:g.19924726A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | Y60A3A | ||||
Flanking_sequences | TCCAGGCAGCCAACTACCTCGACATCCGTGGGCTTTTGGA | GTGACCACCCAGAATGTGGCTAACATGATG | ||||||
Mapping_target | Y60A3A | |||||||
Source_location | 225 | CHROMOSOME_V | 19924695 | 19924695 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004810 | ||||||
Transcript | Y60A3A.18.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 1 | tolerated | ||||||
PolyPhen | 0 | benign | ||||||
HGVSc | Y60A3A.18.1:c.345A>C | |||||||
HGVSp | CE24523:p.Glu115Asp | |||||||
cDNA_position | 374 | |||||||
CDS_position | 345 | |||||||
Protein_position | 115 | |||||||
Exon_number | 4/5 | |||||||
Codon_change | gaA/gaC | |||||||
Amino_acid_change | E/D | |||||||
Method | WGS_Flibotte |