WormBase Tree Display for Variation: WBVar01813150
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WBVar01813150 | Name | Public_name | WBVar01813150 | |||||
---|---|---|---|---|---|---|---|---|
Other_name (3) | ||||||||
HGVSg | CHROMOSOME_V:g.17939497C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y59A8B | ||||
Flanking_sequences | CATTAAATGCAGTTTCACGTCGATCGTTGC | ACGTGTCGCCAGCGGATGACGTGGCTCAGT | ||||||
Mapping_target | Y59A8B | |||||||
Source_location | 225 | CHROMOSOME_V | 17939471 | 17939471 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001080 | ||||||
Transcript | Y59A8B.1a.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 0.04 | deleterious_low_confidence | ||||||
PolyPhen | 0.026 | benign | ||||||
HGVSc | Y59A8B.1a.1:c.4309G>A | |||||||
HGVSp | CE26205:p.Gly1437Ser | |||||||
cDNA_position | 4474 | |||||||
CDS_position | 4309 | |||||||
Protein_position | 1437 | |||||||
Exon_number | 9/13 | |||||||
Codon_change | Ggc/Agc | |||||||
Amino_acid_change | G/S | |||||||
Method | WGS_Flibotte |