WormBase Tree Display for Variation: WBVar00143229
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WBVar00143229 | Evidence | Paper_evidence | WBPaper00006355 | |||
---|---|---|---|---|---|---|
Name | Public_name | e459 | ||||
Other_name | Y59A8B.1a.1:c.3872G>A | |||||
CE26205:p.Gly1291Glu | ||||||
HGVSg | CHROMOSOME_V:g.17940935C>T | |||||
Sequence_details | SMap | S_parent | Sequence | Y59A8B | ||
Flanking_sequences | aaaacaatggagtacccctatttgccatcg | agtaatggaaaatgcggcagaagcgctgca | ||||
Mapping_target | Y59A8B | |||||
Type_of_mutation | Substitution | g | a | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Laboratory | CB | |||||
Status | Live | |||||
Affects | Gene | WBGene00001080 | ||||
Transcript | Y59A8B.1a.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 0 | deleterious_low_confidence | ||||
PolyPhen | 0.953 | possibly_damaging | ||||
HGVSc | Y59A8B.1a.1:c.3872G>A | |||||
HGVSp | CE26205:p.Gly1291Glu | |||||
cDNA_position | 4037 | |||||
CDS_position | 3872 | |||||
Protein_position | 1291 | |||||
Exon_number | 8/13 | |||||
Codon_change | gGa/gAa | |||||
Amino_acid_change | G/E | |||||
Interactor | WBInteraction000052181 | |||||
WBInteraction000052433 | ||||||
Genetics | Interpolated_map_position | V | 13.3322 | |||
Mapping_data | In_2_point | 170 | ||||
In_multi_point | 616 | |||||
Description (2) | ||||||
Reference | WBPaper00016180 | |||||
WBPaper00001011 | ||||||
WBPaper00000666 | ||||||
WBPaper00006355 | ||||||
WBPaper00013900 | ||||||
Method | Substitution_allele |