WormBase Tree Display for Variation: WBVar00055195
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WBVar00055195 | Name | Public_name | WBVar00055195 | |||
---|---|---|---|---|---|---|
Other_name (11) | ||||||
HGVSg | CHROMOSOME_V:g.18083333G>T | |||||
Sequence_details | SMap | S_parent | Sequence | Y59A8B | ||
Flanking_sequences | ttgcggcagactttacggacagaaa | cctgaaattttcaatttaattaatc | ||||
Mapping_target | Y59A8B | |||||
Type_of_mutation | Substitution | G | T | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (15) | ||||||
Laboratory | RW | |||||
Person | WBPerson1562 | |||||
Analysis | WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | ||||||
Status | Live | |||||
Affects | Gene | WBGene00013348 | ||||
Transcript | Y59A8B.11c.1 (12) | |||||
Y59A8B.11a.1 | VEP_consequence | missense_variant,splice_region_variant | ||||
VEP_impact | MODERATE | |||||
SIFT | 0.06 | tolerated | ||||
PolyPhen | 0.954 | possibly_damaging | ||||
HGVSc | Y59A8B.11a.1:c.64C>A | |||||
HGVSp | CE24504:p.Leu22Ile | |||||
cDNA_position | 207 | |||||
CDS_position | 64 | |||||
Protein_position | 22 | |||||
Exon_number | 4/6 | |||||
Codon_change | Ctt/Att | |||||
Amino_acid_change | L/I | |||||
Y59A8B.11a.2 (12) | ||||||
Y59A8B.11a.3 (12) | ||||||
Y59A8B.11b.1 (12) | ||||||
Y59A8B.11a.4 (12) | ||||||
Remark | [20081124 db] this Variation was previously named hw92137 | |||||
Method | WGS_Hawaiian_Waterston |