WormBase Tree Display for Variation: WBVar00084386
expand all nodes | collapse all nodes | view schema
| WBVar00084386 | Name | Public_name | WBVar00084386 | ||
|---|---|---|---|---|---|
| Other_name (16) | |||||
| HGVSg | CHROMOSOME_X:g.13872435C>A | ||||
| Sequence_details | SMap | S_parent | Sequence | T21H8 | |
| Flanking_sequences | gtttgctacccatcttttgtgcaac | catggggggtagattacttgagaaa | |||
| Mapping_target | T21H8 | ||||
| Type_of_mutation | Substitution | C | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (38) | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar00217179 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00011904 | |||
| Transcript | T21H8.1m.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T21H8.1m.1:c.64-1903G>T | ||||
| Intron_number | 1/12 | ||||
| T21H8.1l.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T21H8.1l.1:c.325-1903G>T | ||||
| Intron_number | 3/14 | ||||
| T21H8.1k.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T21H8.1k.2:c.325-1903G>T | ||||
| Intron_number | 4/16 | ||||
| T21H8.1k.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T21H8.1k.1:c.325-1903G>T | ||||
| Intron_number | 5/16 | ||||
| T21H8.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T21H8.1a.1:c.188+120G>T | ||||
| Intron_number | 2/15 | ||||
| T21H8.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T21H8.1d.1:c.188+120G>T | ||||
| Intron_number | 1/13 | ||||
| T21H8.1h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T21H8.1h.1:c.601-1903G>T | ||||
| Intron_number | 5/17 | ||||
| T21H8.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T21H8.1b.1:c.188+120G>T | ||||
| Intron_number | 1/14 | ||||
| T21H8.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T21H8.1c.1:c.188+120G>T | ||||
| Intron_number | 1/12 | ||||
| T21H8.1i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T21H8.1i.1:c.523-1903G>T | ||||
| Intron_number | 5/17 | ||||
| T21H8.1n.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T21H8.1n.1:c.64-1903G>T | ||||
| Intron_number | 1/12 | ||||
| T21H8.1j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T21H8.1j.1:c.523-1903G>T | ||||
| Intron_number | 4/16 | ||||
| T21H8.1g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T21H8.1g.1:c.601-1903G>T | ||||
| Intron_number | 6/18 | ||||
| Remark | [20081124 db] this Variation was previously named hw108746 | ||||
| Method | WGS_Hawaiian_Waterston |
