WormBase Tree Display for Variation: WBVar00090466
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WBVar00090466 | Evidence | Paper_evidence | WBPaper00032261 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | n2415 | |||||
Other_name | T14G12.2.1:c.472G>A | ||||||
CE35769:p.Glu158Lys | |||||||
HGVSg | CHROMOSOME_X:g.3730705G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | T14G12 | |||
Flanking_sequences | atgatgttcacgaattccagcaagcgaagg | agtctaccggggattttatgaaacggtagg | |||||
Mapping_target | T14G12 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00032261 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00027257 | ||||||
WBStrain00029071 | |||||||
Laboratory | MT | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00006454 | |||||
Transcript | T14G12.2.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
SIFT | 0.59 | tolerated | |||||
PolyPhen | 0.006 | benign | |||||
HGVSc | T14G12.2.1:c.472G>A | ||||||
HGVSp | CE35769:p.Glu158Lys | ||||||
cDNA_position | 582 | ||||||
CDS_position | 472 | ||||||
Protein_position | 158 | ||||||
Exon_number | 7/10 | ||||||
Codon_change | Gag/Aag | ||||||
Amino_acid_change | E/K | ||||||
Interactor | WBInteraction000524187 | ||||||
Genetics | Interpolated_map_position | X | -9.6739 | ||||
Reference | WBPaper00032261 | ||||||
Method | Substitution_allele |