WormBase Tree Display for Variation: WBVar01773817
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WBVar01773817 | Name | Public_name | WBVar01773817 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00474390 | |||||||
T01G6.6a.1:c.900G>C | ||||||||
CE42457:p.Glu302Asp | ||||||||
CE35608:p.Glu300Asp | ||||||||
T01G6.6b.1:c.906G>C | ||||||||
HGVSg | CHROMOSOME_V:g.486486G>C | |||||||
Sequence_details | SMap | S_parent | Sequence | T01G6 | ||||
Flanking_sequences | GCACAATGAAGTAGTAGATCTGATCGTCGA | CTGAACCCTTCGGAAATTGAAATGACTTTT | ||||||
Mapping_target | T01G6 | |||||||
Source_location | 225 | CHROMOSOME_V | 486487 | 486487 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020153 | ||||||
Transcript | T01G6.6b.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 0.68 | tolerated | ||||||
PolyPhen | 0.007 | benign | ||||||
HGVSc | T01G6.6b.1:c.906G>C | |||||||
HGVSp | CE42457:p.Glu302Asp | |||||||
cDNA_position | 939 | |||||||
CDS_position | 906 | |||||||
Protein_position | 302 | |||||||
Exon_number | 6/8 | |||||||
Codon_change | gaG/gaC | |||||||
Amino_acid_change | E/D | |||||||
T01G6.6a.1 (12) | ||||||||
Method | WGS_Flibotte |