WormBase Tree Display for Variation: WBVar01441914
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WBVar01441914 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01441914 | ||||
Other_name | CE19779:p.Ser282= | |||||
F08G2.7.1:c.846T>G | ||||||
HGVSg | CHROMOSOME_II:g.13838122A>C | |||||
Sequence_details | SMap | S_parent | Sequence | F08G2 | ||
Flanking_sequences | CATGAAAGAGTACCTCTGCGCGGAGCCCCC | GAATTCGGCTGAAACTGGAACATCTGCGGG | ||||
Mapping_target | F08G2 | |||||
Type_of_mutation | Substitution | a | c | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00000033 | From_analysis | WGS_Andersen | |||
WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00004445 | From_analysis | WGS_Andersen | ||||
WBStrain00004599 | From_analysis | WGS_Andersen | ||||
Million_mutation_project_reanalysis | ||||||
WBStrain00004601 | From_analysis | WGS_Andersen | ||||
WBStrain00004604 | From_analysis | WGS_Andersen | ||||
WBStrain00005297 | From_analysis | WGS_Andersen | ||||
WBStrain00005298 | From_analysis | WGS_Andersen | ||||
WBStrain00005303 | From_analysis | WGS_Andersen | ||||
WBStrain00005304 | From_analysis | WGS_Andersen | ||||
WBStrain00005306 | From_analysis | WGS_Andersen | ||||
WBStrain00005308 | From_analysis | WGS_Andersen | ||||
WBStrain00005312 | From_analysis | WGS_Andersen | ||||
WBStrain00005313 | From_analysis | WGS_Andersen | ||||
WBStrain00006369 | From_analysis | WGS_Andersen | ||||
WBStrain00006616 | From_analysis | WGS_Andersen | ||||
WBStrain00006618 | From_analysis | WGS_Andersen | ||||
WBStrain00006625 | From_analysis | WGS_Andersen | ||||
Million_mutation_project_reanalysis | ||||||
WBStrain00023065 | From_analysis | WGS_Andersen | ||||
WBStrain00023140 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193329327 | ||
dbSNP_ss | ss | 295505246 | ||||
Status | Live | |||||
Affects | Gene | WBGene00008578 | ||||
Transcript | F08G2.7.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | F08G2.7.1:c.846T>G | |||||
HGVSp | CE19779:p.Ser282= | |||||
cDNA_position | 933 | |||||
CDS_position | 846 | |||||
Protein_position | 282 | |||||
Exon_number | 4/7 | |||||
Codon_change | tcT/tcG | |||||
Amino_acid_change | S | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |