WormBase Tree Display for Variation: WBVar00271114
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| WBVar00271114 | Evidence | Paper_evidence | WBPaper00005369 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00271114 | |||
| Other_name | uCE4-1521 | ||||
| cewivar00695436 | |||||
| Y105C5B.21a.1:c.800-519_800-518insAA | |||||
| Y105C5B.21g.1:c.290-519_290-518insAA | |||||
| Y105C5B.21f.1:c.581-519_581-518insAA | |||||
| Y105C5B.21e.1:c.800-519_800-518insAA | |||||
| Y105C5B.21c.1:c.581-519_581-518insAA | |||||
| Y105C5B.21b.1:c.290-519_290-518insAA | |||||
| HGVSg | CHROMOSOME_IV:g.16006568_16006569insTT | ||||
| Sequence_details | SMap | S_parent | Sequence | Y105C5B | |
| Flanking_sequences | GAACAAGATGGGTAAAAGATAACGGGGAAAGGGACAGTGGAAAGGTCAGATTTGATGGGACATGACAGGATGAGAGTTCGACAGTTTTGTGAGGGGAAAAG | GGTGAGAATTGCTGGAAGTCAGACGATTGGTAATATAGTAACTTTGGAAAAAAGGAAAAAGTGAAATAGATACTGTGAAACTGTAATTTTTTTTCCAAAA | |||
| Mapping_target | Y105C5B | ||||
| Type_of_mutation | Insertion | TT | |||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Analysis | SNP_Swan | ||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01969470 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00002175 | |||
| Transcript | Y105C5B.21g.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105C5B.21g.1:c.290-519_290-518insAA | ||||
| Intron_number | 2/10 | ||||
| Y105C5B.21e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105C5B.21e.1:c.800-519_800-518insAA | ||||
| Intron_number | 5/14 | ||||
| Y105C5B.21f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105C5B.21f.1:c.581-519_581-518insAA | ||||
| Intron_number | 3/11 | ||||
| Y105C5B.21c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105C5B.21c.1:c.581-519_581-518insAA | ||||
| Intron_number | 3/11 | ||||
| Y105C5B.21b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105C5B.21b.1:c.290-519_290-518insAA | ||||
| Intron_number | 2/10 | ||||
| Y105C5B.21a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105C5B.21a.1:c.800-519_800-518insAA | ||||
| Intron_number | 5/14 | ||||
| Reference | WBPaper00005369 | ||||
| Method | SNP_Swan |
