WormBase Tree Display for Variation: WBVar00144555
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| WBVar00144555 | Name | Public_name | e2091 | ||||
|---|---|---|---|---|---|---|---|
| Other_name | C38D4.6b.2:c.764+101A>G | ||||||
| C38D4.6a.2:c.770+101A>G | |||||||
| C38D4.6a.1:c.770+101A>G | |||||||
| C38D4.6b.1:c.764+101A>G | |||||||
| C38D4.6c.1:c.626+101A>G | |||||||
| HGVSg | CHROMOSOME_III:g.4806599T>C | ||||||
| Sequence_details | SMap | S_parent | Sequence | C38D4 | |||
| Flanking_sequences | catacaccgcatcacctttaccgcctttca | ctctgtgccaaatcaagaaaacttgatatt | |||||
| Mapping_target | C38D4 | ||||||
| Type_of_mutation | Substitution | t | c | Paper_evidence | WBPaper00004312 | ||
| Curator_confirmed | WBPerson51134 | ||||||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00004520 | ||||||
| WBStrain00007179 | |||||||
| WBStrain00007180 | |||||||
| WBStrain00007181 | |||||||
| WBStrain00007183 | |||||||
| WBStrain00007184 | |||||||
| Laboratory | CB | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00003912 | |||||
| Transcript | C38D4.6b.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | C38D4.6b.1:c.764+101A>G | ||||||
| Intron_number | 7/8 | ||||||
| C38D4.6a.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | C38D4.6a.1:c.770+101A>G | ||||||
| Intron_number | 6/7 | ||||||
| C38D4.6b.2 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | C38D4.6b.2:c.764+101A>G | ||||||
| Intron_number | 6/7 | ||||||
| C38D4.6c.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | C38D4.6c.1:c.626+101A>G | ||||||
| Intron_number | 4/5 | ||||||
| C38D4.6a.2 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | C38D4.6a.2:c.770+101A>G | ||||||
| Intron_number | 7/8 | ||||||
| Interactor (12) | |||||||
| Genetics | Interpolated_map_position | III | -2.4658 | ||||
| Mapping_data | In_2_point | 4229 | |||||
| 6036 | |||||||
| In_multi_point | 1482 | ||||||
| 1483 | |||||||
| 2081 | |||||||
| 2083 | |||||||
| 2085 | |||||||
| 2086 | |||||||
| Description | Phenotype (8) | ||||||
| Reference | WBPaper00003428 | ||||||
| WBPaper00004312 | |||||||
| WBPaper00010528 | |||||||
| WBPaper00022899 | |||||||
| WBPaper00016871 | |||||||
| WBPaper00014489 | |||||||
| WBPaper00014562 | |||||||
| WBPaper00004853 | |||||||
| WBPaper00004616 | |||||||
| WBPaper00011184 | |||||||
| WBPaper00015464 | |||||||
| WBPaper00022849 | |||||||
| WBPaper00015009 | |||||||
| WBPaper00024228 | |||||||
| WBPaper00014356 | |||||||
| WBPaper00014692 | |||||||
| WBPaper00014693 | |||||||
| WBPaper00013910 | |||||||
| WBPaper00015661 | |||||||
| WBPaper00021748 | |||||||
| WBPaper00018407 | |||||||
| Remark | Curated Sequence_details based on WBPaper00004312 | Paper_evidence | WBPaper00004312 | ||||
| Curator_confirmed | WBPerson51134 | ||||||
| Method | Substitution_allele |
