WormBase Tree Display for Variation: WBVar00248313
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WBVar00248313 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00248313 | |||
Other_name | snp_Y105E8B[2] | ||||
Y105E8B.1l.1:c.689-25_689-24del | |||||
Y105E8B.1p.1:c.773-25_773-24del | |||||
Y105E8B.1c.1:c.*126-25_*126-24del | |||||
Y105E8B.1b.1:c.*126-25_*126-24del | |||||
Y105E8B.1e.1:c.*4-25_*4-24del | |||||
Y105E8B.1d.1:c.*126-25_*126-24del | |||||
Y105E8B.1s.1:c.773-25_773-24del | |||||
Y105E8B.1k.1:c.689-25_689-24del | |||||
Y105E8B.1m.1:c.500-25_500-24del | |||||
Y105E8B.1r.1:c.773-25_773-24del | |||||
Y105E8B.1t.1:c.*126-25_*126-24del | |||||
Y105E8B.1q.1:c.773-25_773-24del | |||||
Y105E8B.1a.1:c.773-25_773-24del | |||||
Y105E8B.1n.1:c.386-25_386-24del | |||||
Y105E8B.1f.1:c.*160-25_*160-24del | |||||
Y105E8B.1o.1:c.773-25_773-24del | |||||
HGVSg | CHROMOSOME_I:g.14621620_14621621del | ||||
Sequence_details | SMap | S_parent | Sequence | Y105E8B | |
Flanking_sequences | gtctgaaaaaaaagtatatatatat | ggagattaacaggtattttgtggag | |||
Mapping_target | Y105E8B | ||||
Type_of_mutation | Deletion | AT | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00002978 | |||
Transcript (16) | |||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9221 VarD2=AT | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_Y105E8B.2 | |||||
[20040130 db] this Allele was previously named snp_Y105E8B.2 | |||||
[20090224 db] original Wicks name : Y105E8B:10625..11513@335 Psnp=0.9221 VarD2=AT | |||||
[20090224 db] original Wicks id : yw15b01.s1@268,-,59 | |||||
Method | SNP_Wicks |