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WormBase Tree Display for Variation: WBVar00145224

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Name Class

WBVar00145224NamePublic_nameev400
Other_nameCE04538:p.Gln99Ter
F41C6.1.1:c.295C>T
F41C6.1.2:c.295C>T
HGVSgCHROMOSOME_X:g.6890534C>T
Sequence_detailsSMapS_parentSequenceF41C6
Flanking_sequencestgtgacacttgtgatgctagaaaccatttcaatcccatccagcctctcttctaactgatc
Mapping_targetF41C6
Type_of_mutationSubstitutionctPaper_evidenceWBPaper00002378
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
Strain (69)
LaboratoryNW
StatusLive
AffectsGeneWBGene00006746
TranscriptF41C6.1.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScF41C6.1.1:c.295C>T
HGVSpCE04538:p.Gln99Ter
cDNA_position361
CDS_position295
Protein_position99
Exon_number4/15
Codon_changeCaa/Taa
Amino_acid_changeQ/*
F41C6.1.2VEP_consequencestop_gained
VEP_impactHIGH
HGVScF41C6.1.2:c.295C>T
HGVSpCE04538:p.Gln99Ter
cDNA_position361
CDS_position295
Protein_position99
Exon_number4/16
Codon_changeCaa/Taa
Amino_acid_changeQ/*
InteractorWBInteraction000500106
WBInteraction000500176
WBInteraction000500179
WBInteraction000500183
WBInteraction000500189
WBInteraction000500382
WBInteraction000500383
WBInteraction000500888
WBInteraction000500929
WBInteraction000500936
WBInteraction000501329
WBInteraction000501345
WBInteraction000501346
WBInteraction000501811
WBInteraction000502341
WBInteraction000502343
WBInteraction000503048
WBInteraction000503851
WBInteraction000503852
WBInteraction000503853
WBInteraction000518364
WBInteraction000518365
WBInteraction000518555
WBInteraction000518607
WBInteraction000519425
WBInteraction000521266
WBInteraction000521727
WBInteraction000521728
WBInteraction000524362
WBInteraction000538526
WBInteraction000538753
IsolationMutagenEMS
GeneticsInterpolated_map_positionX-2.1004
Mapping_dataIn_multi_point4795
DescriptionPhenotype (24)
Phenotype_not_observed (7)
Reference (40)
MethodSubstitution_allele