WormBase Tree Display for Variation: WBVar00143398

WBVar00143398 Evidence: Paper_evidence: WBPaper00005927
  Name: Public_name: e678
  Sequence_details: Type_of_mutation: Deletion
    SeqStatus: Pending_curation
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain (225)
    Laboratory: CB
      LW
    Status: Live
  Affects: Gene: WBGene00003056
    Interactor: WBInteraction000521785
      WBInteraction000521941
      WBInteraction000524031
      WBInteraction000537302
  Genetics: Mapping_data: In_2_point: 154
        159
        162
        164
        165
        166
        167
        168
        169
        170
        171
        172
        173
        174
        175
        176
        283
        286
        288
        299
        374
        397
        414
        427
        428
        434
        475
        624
        1829
        3148
        3150
        3384
        3634
        3731
        4456
        4467
        4570
        6103
        6110
        6111
        6119
        6122
        6135
        6172
        6173
        6187
      In_multi_point (108)
      In_pos_neg_data (19)
    Marked_rearrangement: szT1[lon-2(e678) unc-29(e403)]
      szT1[lon-2(e678)]
  Description: Phenotype: WBPhenotype:0000022 Paper_evidence: WBPaper00005927
          WBPaper00000031
          WBPaper00029002
          WBPaper00043908
          WBPaper00005747
        Person_evidence: WBPerson261
        Curator_confirmed (4)
        Remark: 50% longer than wild type Paper_evidence: WBPaper00005927
            Curator_confirmed: WBPerson48
          about 50% longer than wildtype at all stages Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
          Table 1 Paper_evidence: WBPaper00005747
            Curator_confirmed: WBPerson2987
        Phenotype_assay: Genotype: kaIs12 [col-19::gfp] Paper_evidence: WBPaper00005747
              Curator_confirmed: WBPerson2987
        Ease_of_scoring: ES3_Easy_to_score: Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
      WBPhenotype:0000050 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: some embryonic lethality Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
        Penetrance: Incomplete: Person_evidence: WBPerson261
              Curator_confirmed: WBPerson712
      WBPhenotype:0000164 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0000444 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: Male bursa slightly elongated. Mating always successful (ME3), possibly mating not successful (ME0) at 25C. Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
        Penetrance: Incomplete: Person_evidence: WBPerson261
              Curator_confirmed: WBPerson712
      WBPhenotype:0000961 Paper_evidence: WBPaper00005747
        Curator_confirmed: WBPerson2987
        Remark: Table 1 Paper_evidence: WBPaper00005747
            Curator_confirmed: WBPerson2987
        Phenotype_assay: Genotype: kaIs12 [col-19::gfp] Paper_evidence: WBPaper00005747
              Curator_confirmed: WBPerson2987
      WBPhenotype:0001005 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0001183 Paper_evidence: WBPaper00053362
        Curator_confirmed: WBPerson25685
      WBPhenotype:0001412 Paper_evidence: WBPaper00005747
        Curator_confirmed: WBPerson2987
        Remark: Authors report "multiple or discontinuous ala" (Table 1) Paper_evidence: WBPaper00005747
            Curator_confirmed: WBPerson2987
        Phenotype_assay: Genotype: kaIs12 [col-19::gfp] Paper_evidence: WBPaper00005747
              Curator_confirmed: WBPerson2987
      WBPhenotype:0001517 Paper_evidence: WBPaper00005747
        Curator_confirmed: WBPerson2987
        Remark: Authors report "abnormal branched annuli (lateral hypodermis)" and "wide annuli" (Table 1) Paper_evidence: WBPaper00005747
            Curator_confirmed: WBPerson2987
        Phenotype_assay: Genotype: kaIs12 [col-19::gfp] Paper_evidence: WBPaper00005747
              Curator_confirmed: WBPerson2987
      WBPhenotype:0002284 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0002289 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0002293 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0002295 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0002300 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0002301 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0002309 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0002312 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0002319 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0002322 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0002325 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0002337 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0002345 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0004022 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
      WBPhenotype:0004023 Paper_evidence: WBPaper00043908
        Curator_confirmed: WBPerson2987
    Phenotype_not_observed (3)
  Reference (33)
  Remark: e678 is a ~9 kb deletion
    Variation stub/paper connection generated from the May 2021 NN VFP dataset.
    Created by WBPerson51134 from the NN_VFP_triage_pipeline
  Method: Deletion_allele