WormBase Tree Display for Variation: WBVar00143380
expand all nodes | collapse all nodes | view schema
WBVar00143380 | Evidence | Paper_evidence | WBPaper00005631 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e660 | |||||
Other_name | CE29503:p.Pro54Leu | ||||||
F56A11.3.1:c.161C>T | |||||||
HGVSg | CHROMOSOME_IV:g.565544C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | F56A11 | |||
Flanking_sequences | gaatgggagacgttgttcgatttgtgtgtc | ggacaatgaggagggacgaaacgatggcga | |||||
Mapping_target | F56A11 | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00005631 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00001165 | |||||
Transcript | F56A11.3.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
SIFT | 0 | deleterious | |||||
PolyPhen | 0.999 | probably_damaging | |||||
HGVSc | F56A11.3.1:c.161C>T | ||||||
HGVSp | CE29503:p.Pro54Leu | ||||||
cDNA_position | 165 | ||||||
CDS_position | 161 | ||||||
Protein_position | 54 | ||||||
Exon_number | 3/6 | ||||||
Codon_change | cCg/cTg | ||||||
Amino_acid_change | P/L | ||||||
Genetics | Interpolated_map_position | IV | -25.6324 | ||||
Description | Phenotype (3) | ||||||
Reference | WBPaper00005631 | ||||||
Method | Substitution_allele |