WormBase Tree Display for Variation: WBVar01875355
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WBVar01875355 | Name | Public_name | WBVar01875355 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00589710 | |||||||
CE18597:p.His279Tyr | ||||||||
F16H6.1.1:c.835C>T | ||||||||
HGVSg | CHROMOSOME_V:g.18193181C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F16H6 | ||||
Flanking_sequences | ACTATTCCAGCTGGAAAATGGATTAGCAGC | ATTGTGATACTTCTCTACCATTTGTTTGTA | ||||||
Mapping_target | F16H6 | |||||||
Source_location | 225 | CHROMOSOME_V | 18193153 | 18193153 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00008891 | ||||||
Transcript | F16H6.1.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 0.31 | tolerated | ||||||
PolyPhen | 0 | benign | ||||||
HGVSc | F16H6.1.1:c.835C>T | |||||||
HGVSp | CE18597:p.His279Tyr | |||||||
cDNA_position | 866 | |||||||
CDS_position | 835 | |||||||
Protein_position | 279 | |||||||
Exon_number | 3/5 | |||||||
Codon_change | Cat/Tat | |||||||
Amino_acid_change | H/Y | |||||||
Method | WGS_Flibotte |