WormBase Tree Display for Sequence: Y40B1B
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| Y40B1B | DNA | Y40B1B | 29313 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00012738 | 14083 | 16557 | |
| WBGene00199760 | 8917 | 8818 | ||||
| WBGene00220148 | 17086 | 17186 | ||||
| WBGene00005010 | 16652 | 28812 | ||||
| WBGene00012740 | 7507 | 13205 | ||||
| WBGene00044066 | 3742 | 2591 | ||||
| WBGene00012739 | 7065 | 5045 | ||||
| WBGene00305727 | 9390 | 10908 | ||||
| CDS_child (150) | ||||||
| Transcript | Y40B1B.9 | 8917 | 8818 | |||
| Y40B1B.10 | 17086 | 17186 | ||||
| Y40B1B.11 | 9390 | 10908 | ||||
| Y40B1B.3.1 | 3742 | 2591 | ||||
| Y40B1B.5.1 | 14083 | 16557 | ||||
| Y40B1B.6.1 | 16652 | 28810 | ||||
| Y40B1B.6.2 | 16660 | 28812 | ||||
| Y40B1B.7.1 | 7065 | 5045 | ||||
| Y40B1B.8.1 | 7507 | 13205 | ||||
| Nongenomic | yk372d6 | 5110 | 7067 | |||
| yk141d9 | 16655 | 28524 | ||||
| PCR_product (18) | ||||||
| Allele (453) | ||||||
| Oligo_set | Aff_Y40B1B.3 | 3224 | 2625 | |||
| Aff_Y40B1B.5 | 14138 | 16303 | ||||
| Aff_Y40B1B.6 | 25484 | 28524 | ||||
| Feature_object (259) | ||||||
| Feature_data | Y40B1B:Polysome | 1 | 29313 | |||
| Y40B1B:TranscriptionallyActiveRegion | 1 | 29313 | ||||
| Y40B1B:ChIPSeqTF | 1 | 29313 | ||||
| Y40B1B:TRF | 1 | 29313 | ||||
| Y40B1B:Dust | 1 | 29313 | ||||
| Y40B1B:inverted | 1 | 29313 | ||||
| Homol_data (19) | ||||||
| Structure | From | Source | CHROMOSOME_I | |||
| Overlap_right | Y48G10A | 29204 | ||||
| Overlap_left | W05H12 | |||||
| Clone_left_end | Y40B1B | 1 | ||||
| Clone_right_end | W05H12 | 102 | ||||
| Y40B1 | 29313 | |||||
| Y40B1B | 29313 | |||||
| DB_info | Database | EMBL | NDB_AC | AL032636 | ||
| NDB_SV | AL032636.1 | |||||
| Secondary_accession | AL009206 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Harris BR | ||||
| From_laboratory | HX | |||||
| Date_directory | 980721 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | Y40B1B | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 79ea062038f9ce5d8a6a037cb4f9848b | ||||
| Status | Finished | 21 Jul 1998 00:00:00 | ||||
| Submitted | 29 Oct 1998 00:00:00 | |||||
| Annotated | 01 Jan 1980 00:00:00 | |||||
| Map | Sequence-I | Ends | Left | 6835 | ||
| Right | 6847 | |||||
| Interpolated_map_position | I | 20.2888 | ||||
| Assembly_tags | Clone right end | 102 | 99 | W05H12 | ||
| 29313 | 29308 | Y40B1 | ||||
| Finished Left | 1 | 10 | Y40B1B | |||
| annotation | 23299 | 23301 | First select a Feature - [ ] Unsure [X] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [X] Single clone region [ ] Forced join [ ] Other Add a comment here - These three bases are determined only by primer chemistry | |||
| Finished Right | 29313 | 29308 | Y40B1B | |||
| Method | Genomic_canonical |
