WormBase Tree Display for Sequence: T27D1

T27D1 DNA: T27D1 22559
  SMap: S_child: Gene_child: WBGene00012084 17761 6342
        WBGene00202195 1625 1774
      CDS_child (63)
      Transcript: T27D1.4 1625 1774
        T27D1.3.1 8897 6342
        T27D1.3.2 17761 6342
      Transposon: WBTransposon00000406 16589 16162
      PCR_product: TH:323B5 6681 8298
        cenix:323-b5 6680 8299
        mv_T27D1.3 6534 8913
        p_T27D1.3_93 8915 10914
        sjj_T27D1.3 6680 8299
        smd_T27D1.1 20929 22559
      Allele (460)
      Oligo_set: Aff_T27D1.1 22296 20985
        Aff_T27D1.3 7824 6532
      Feature_object (156)
      Feature_data: T27D1:Polysome 1 22559
        T27D1:TranscriptionallyActiveRegion 1 22559
        T27D1:ChIPSeqTF 1 22559
        T27D1:TRF 1 22559
        T27D1:Dust 1 22559
        T27D1:inverted 1 22559
      Homol_data (11)
  Structure: From: Source: CHROMOSOME_III
    Overlap_right: C14B1 22459
    Overlap_left: C46F11
    Clone_left_end: T27D1 1
      C14B1 22459
    Clone_right_end: C46F11 8174
  DB_info: Database: EMBL NDB_AC Z48245
        NDB_SV Z48245.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Sims MA
    From_laboratory: HX
    Date_directory: 951101
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: T27D1
  Properties: Genomic_canonical
    Checksum: MD5: 1e5d048c41a1d92c7bdd39a694d0cce6
    Status: Finished: 01 Nov 1995 00:00:00
      Submitted: 14 Feb 1995 00:00:00
      Annotated: 14 Feb 1995 00:00:00
  Map: Sequence-III Ends: Left: 1581
        Right: 1595
  Interpolated_map_position: III -4.81913
  Assembly_tags: annotation 1 4 Beginning of T27D1 edit @ position 14774. End of C46F11 edit. End of C46F11 @ postion 22947.
          Beginning of T27D1 edit.
      8171 8174 End of C46F11 @ position 22947.
      22458 22462 End of T27D1 edit @ postion 37231 + 100 base overlap = 37331 Beginning of C14B1
      3197 3197 Point muation on a single PCR clone. G changed to an A
      3189 3189 Point mutation on a single PCR clone. A changed to a T
      3101 3101 Point mutation on single PCR clone. A changed to a G
      3146 3146 Point mutation on a single PCR clone. T changed to a G
      3280 3279 Single PCR clone has ten T's. Consesus has nine
          Single PCR clone has ten T's. Consensus has nine T's.
        3280 Single PCR clone has ten T's. The consensus has nine T's.
      3351 3351 Point mutation on a single PCR clone. A changed to G
      3108 3108 Point mutation on single PCR clone. T changed to C
      3358 3358 Point muation on asingle PCR clone. G changed to an A
      3484 3484 Point mutation on a single PCR clone A changed to G
      3281 3281 Point mutation on a single PCR clone. T changed to an A
      3447 3447 Point muation on a single PCR clone T changed to a C
      3491 3491 Point mutation on single PCR clone A changed to a G
      3523 3523 point mutation on single PCR clone T changed to C
      3469 3469 Single PCR clone has eight A's. The consensus has seven A's.
      3439 3439 Point muation on a single PCR clone T changed to an A
      3410 3410 Point mutation on a single PCR clone. T changed to a G
      3565 3565 Point mutation on single PCR clone T changed to C
      3603 3603 Point mutatiopn on a single PCR clone. A changed to a G.
      3605 3605 Point mutation on a single PCR clone. A changed to a T
      3801 3801 Point mutation on a single PCR clone. T changed to a C
      3953 3953 Point mutation on a single PCR clone. G changed to an A
      3897 3897 Point mutation on PCR clone T changed to a C
      3907 3907 Point mutation on single PCR clone. T changed to an A
      3798 3798 point mutation on a single PCR clone. G changed to an A.
      3942 3942 Point mutation on single PCR clone A changed to a G
      4118 4126 2 reads (one walk, one pcr product) read GAAGA to the left of this sequence then go into vector
      4176 4176 Point mutation on a single PCR clone. A changed to a T
      4383 4383 Point mutation on a single PCR clone. A changed to a G
      4635 4635 Point mutation on a singgle PCR clone. A changed to a G
      4612 4612 Point mutation on a single PCR clone. T changed to a C
      4529 4529 Point mutation on a single PCR clone A changed to a G
      4477 4477 Point mutation on single PCR clone. A changed to a G
      4636 4636 Point mutation on a sinlge PCR clone. G changed to an A
      22459 22462 Beginning of C14B1.
  Method: Genomic_canonical