WormBase Tree Display for Sequence: T20H9
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| T20H9 | DNA | T20H9 | 13469 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00020639 | 10905 | 12330 | |
| WBGene00020640 | 8532 | 9866 | ||||
| WBGene00020642 | 1551 | 4614 | ||||
| WBGene00020637 | 6531 | 5015 | ||||
| WBGene00020641 | 7040 | 8072 | ||||
| CDS_child (42) | ||||||
| Transcript | T20H9.1.1 | 6531 | 5015 | |||
| T20H9.3.1 | 10905 | 12330 | ||||
| T20H9.4.1 | 8532 | 9866 | ||||
| Pseudogene | T20H9.5 | 7040 | 8072 | |||
| T20H9.6 | 1551 | 4614 | ||||
| PCR_product (26) | ||||||
| Allele (230) | ||||||
| Oligo_set | Aff_T20H9.1 | 5705 | 5055 | |||
| Aff_T20H9.2 | 13215 | 12636 | ||||
| Aff_T20H9.3 | 11515 | 12461 | ||||
| Aff_T20H9.4 | 9178 | 9865 | ||||
| Aff_T20H9.5 | 7230 | 8072 | ||||
| Aff_T20H9.6 | 3900 | 4614 | ||||
| Feature_object (34) | ||||||
| Feature_data | T20H9:TranscriptionallyActiveRegion | 1 | 13469 | |||
| T20H9:ChIPSeqTF | 1 | 13469 | ||||
| T20H9:TRF | 1 | 13469 | ||||
| T20H9:Dust | 1 | 13469 | ||||
| T20H9:inverted | 1 | 13469 | ||||
| Homol_data | T20H9:RNAi | 1 | 13469 | |||
| T20H9:SAGE | 1 | 13469 | ||||
| T20H9:wublastx_brenneri | 1 | 13469 | ||||
| T20H9:wublastx_briggsae | 1 | 13469 | ||||
| T20H9:wublastx_remanei | 1 | 13469 | ||||
| T20H9:wublastx_worm | 1 | 13469 | ||||
| T20H9:RepeatMasker | 1 | 13469 | ||||
| Structure | From | Source | CHROMOSOME_III | |||
| Overlap_right | Y54F10BL | 13270 | ||||
| Overlap_left | C39B5 | |||||
| Clone_left_end | T20H9 | 1 | ||||
| Clone_right_end | T20H9 | 13469 | ||||
| DB_info | Database | EMBL | NDB_AC | FO080823 | ||
| NDB_ID | _AF040657 | |||||
| NDB_SV | FO080823.2 | |||||
| Secondary_accession | AF040657 | |||||
| DB_remark | The 5' clone is C39B5, 1000 bp overlap; the 3' clone is Y54F10BL, 200 bp overlap. Actual start of this clone is at base position 1 of T20H9; actual end is at 13468 of T20H9. | |||||
| [121025] Sequence correction WBsf898163 : Insertion A1 bases from @ 9006 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Blanchard M | ||||
| Twyman B | ||||||
| From_laboratory | RW | |||||
| Date | 09 Nov 1998 00:00:00 | |||||
| 25 Jun 1997 00:00:00 | ||||||
| Date_directory | ||||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | T20H9 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | d15b19a2ed64bcda82de7c0a9ca4763d | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 09 Nov 1998 00:00:00 | |||||
| Map | Sequence-III | |||||
| Interpolated_map_position | III | -14.8567 | ||||
| Method | Genomic_canonical |
