WormBase Tree Display for Sequence: F55C10
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| F55C10 | DNA | F55C10 | 22151 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00201214 | 1302 | 1165 | |
| WBGene00196237 | 7815 | 7672 | ||||
| WBGene00010108 | 19111 | 21061 | ||||
| WBGene00000554 | 8125 | 10389 | ||||
| WBGene00010109 | 15488 | 16736 | ||||
| WBGene00197183 | 11693 | 11475 | ||||
| WBGene00000727 | 17743 | 18912 | ||||
| WBGene00200032 | 11431 | 11575 | ||||
| WBGene00195423 | 4922 | 5055 | ||||
| WBGene00170192 | 2287 | 2267 | ||||
| CDS_child (89) | ||||||
| Transcript (11) | ||||||
| PCR_product (13) | ||||||
| Allele (269) | ||||||
| Oligo_set | Aff_F55C10.1 | 8161 | 9769 | |||
| Aff_F55C10.2 | 18127 | 18726 | ||||
| Aff_F55C10.4 | 20351 | 20995 | ||||
| Feature_object (208) | ||||||
| Feature_data | F55C10:Polysome | 1 | 22151 | |||
| F55C10:TranscriptionallyActiveRegion | 1 | 22151 | ||||
| F55C10:ChIPSeqTF | 1 | 22151 | ||||
| F55C10:TRF | 1 | 22151 | ||||
| F55C10:Dust | 1 | 22151 | ||||
| F55C10:inverted | 1 | 22151 | ||||
| Homol_data (21) | ||||||
| Structure | From | Source | CHROMOSOME_V | |||
| Overlap_right | K03B8 | 22049 | ||||
| Overlap_left | T02E9 | |||||
| Clone_left_end | F55C10 | 1 | ||||
| K03B8 | 22049 | |||||
| Clone_right_end | T02E9 | 1061 | ||||
| DB_info | Database | EMBL | NDB_AC | Z74036 | ||
| NDB_SV | Z74036.2 | |||||
| DB_remark | [970509 dl] reclipped to remove vector at left end. | |||||
| [991026 dl] removed ambiquous bases, cosmid sequence is now 2 bp longer | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Dobson R | ||||
| From_laboratory | HX | |||||
| Date_directory | 991022 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | F55C10 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 1cc4f5af799bdaf658599ef363f1c75e | ||||
| Status | Finished | 14 Feb 1997 00:00:00 | ||||
| Submitted | 14 Jun 1996 00:00:00 | |||||
| Annotated | 13 May 1997 00:00:00 | |||||
| Map | Sequence-V | Ends | Left | 6482 | ||
| Right | 6516 | |||||
| Interpolated_map_position | V | 3.0785 | ||||
| Assembly_tags | Clone left end | 1 | 4 | F55C10 | ||
| 22049 | 22052 | K03B8 | ||||
| Finished Left | 1 | 4 | F55C10 | |||
| Clone right end | 1061 | 1058 | T02E9 | |||
| annotation | 18513 | 18513 | Apparent mutation during cosmid growth.Subsequent colony pooling gives G/A here | |||
| 21858 | 21270 | Digest suggests this repeated area between 26399 & 27372 should be about 1kb longer.The digest was done on cosmid DNA using Ava1 and BamH1 enzymes | ||||
| 21859 | 21859 | |||||
| 21917 | 21860 | Digest suggests this repeated area between 26399 & 27372 should be about 1kb longer.The digest was done on cosmid DNA using Ava1 and BamH1 enzymes | ||||
| 22151 | 21921 | Digest suggests this repeated area between 26399 & 27372 should be about 1kb longer.The digest was done on cosmid DNA using Ava1 and BamH1 enzymes | ||||
| Finished Right | 22151 | 22148 | F55C10 | |||
| Method | Genomic_canonical |
