WormBase Tree Display for Sequence: F53E2
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| F53E2 | DNA | F53E2 | 11756 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00302980 | 7445 | 9143 | |
| WBGene00018757 | 103 | 3464 | ||||
| CDS_child (35) | ||||||
| Transcript | F53E2.1a.1 | 103 | 3464 | |||
| F53E2.1b.1 | 1419 | 3321 | ||||
| F53E2.2.1 | 7445 | 9143 | ||||
| PCR_product | cenix:48-g3 | 6787 | 8480 | |||
| cenix:51-h8 | 1432 | 2086 | ||||
| mv_F53E2.1 | 1420 | 3319 | ||||
| sjj_F53E2.1 | 1362 | 2529 | ||||
| Allele (139) | ||||||
| Oligo_set | Aff_C38C3.5A | 8231 | 8431 | |||
| Aff_C38C3.5B | 8231 | 11730 | ||||
| Aff_F53E2.A | 1524 | 3321 | ||||
| Aff_F53E2.B | 7259 | 7504 | ||||
| Aff_F53E2.C | 8103 | 11730 | ||||
| Feature_object (181) | ||||||
| Feature_data | F53E2:Polysome | 1 | 11756 | |||
| F53E2:TranscriptionallyActiveRegion | 1 | 11756 | ||||
| F53E2:ChIPSeqTF | 1 | 11756 | ||||
| F53E2:TRF | 1 | 11756 | ||||
| F53E2:Dust | 1 | 11756 | ||||
| F53E2:inverted | 1 | 11756 | ||||
| Homol_data (17) | ||||||
| Structure | From | Source | CHROMOSOME_V | |||
| Overlap_right | C38C3 | 7457 | ||||
| Overlap_left | R09B5 | |||||
| Clone_left_end | C38C3 | 8157 | ||||
| Clone_right_end | R09B5 | 1400 | ||||
| DB_info | Database | EMBL | NDB_AC | FO080818 | ||
| NDB_ID | _AF125953 | |||||
| NDB_SV | FO080818.1 | |||||
| Secondary_accession | AF125953 | |||||
| DB_remark | The 5' clone is R09B5, 1400 bp overlap; the 3' clone is C38C3, 4300 bp overlap. Actual start of this clone is at base position 6850 of R09B5; actual end is at 6442 of C38C3. | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Courtney L | ||||
| Bauer C | ||||||
| Wohldman P | ||||||
| From_laboratory | RW | |||||
| Date | 16 Jun 1998 00:00:00 | |||||
| Date_directory | ||||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | F53E2 | ||||
| Reference | WBPaper00014055 | |||||
| WBPaper00014131 | ||||||
| WBPaper00014410 | ||||||
| WBPaper00014568 | ||||||
| WBPaper00021016 | ||||||
| Remark | added 1200 bp to the 5' end 020114 db | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 03af778db9790301468df2e339b861f0 | ||||
| Status | Finished | |||||
| Submitted | 16 Jun 1998 00:00:00 | |||||
| Map | Sequence-V | |||||
| Interpolated_map_position | V | -18.8806 | ||||
| Method | Genomic_canonical |
