WormBase Tree Display for Sequence: Cbre_Contig254
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| Cbre_Contig254 | DNA | Cbre_Contig254 | 193288 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00192774 | 70050 | 68781 | |
| WBGene00151226 | 113007 | 111680 | ||||
| WBGene00154193 | 173241 | 169478 | ||||
| WBGene00147760 | 75469 | 72534 | ||||
| WBGene00141629 | 160417 | 158097 | ||||
| WBGene00192578 | 161201 | 160837 | ||||
| WBGene00151617 | 141287 | 144873 | ||||
| WBGene00193856 | 176390 | 174809 | ||||
| WBGene00190386 | 6158 | 4673 | ||||
| WBGene00192861 | 184820 | 183691 | ||||
| WBGene00192278 | 4421 | 1582 | ||||
| WBGene00159991 | 139001 | 134952 | ||||
| WBGene00139648 | 84522 | 79104 | ||||
| WBGene00142631 | 105388 | 96530 | ||||
| WBGene00190959 | 156045 | 145354 | ||||
| WBGene00191277 | 64716 | 56399 | ||||
| WBGene00157406 | 107291 | 111271 | ||||
| WBGene00149261 | 163140 | 161838 | ||||
| WBGene00191170 | 181625 | 179699 | ||||
| WBGene00192313 | 131912 | 128061 | ||||
| WBGene00193709 | 193285 | 185641 | ||||
| CDS_child | CBN00923 | 84522 | 79104 | |||
| CBN00923:np197 | 79103 | 84521 | ||||
| CBN02904 | 160417 | 158097 | ||||
| CBN02904:np197 | 158096 | 160416 | ||||
| CBN03906 | 105388 | 96530 | ||||
| CBN03906:np197 | 96529 | 102902 | ||||
| CBN03906:np207 | 102903 | 96530 | ||||
| CBN09035 | 75467 | 72534 | ||||
| CBN09035:np197 | 72533 | 75466 | ||||
| CBN10536 | 163140 | 161838 | ||||
| CBN10536:np197 | 161837 | 163139 | ||||
| CBN12501 | 113007 | 111680 | ||||
| CBN12501:np199 | 112744 | 113006 | ||||
| CBN12892 | 141287 | 144873 | ||||
| CBN15468 | 173241 | 169478 | ||||
| CBN15468:np199 | 173241 | 169478 | ||||
| CBN18681 | 107291 | 111271 | ||||
| CBN21266 | 139001 | 134952 | ||||
| CBN21266:np197 | 134951 | 139000 | ||||
| CBN22951:np199 | 104194 | 105703 | ||||
| CBN22951:np207 | 105388 | 104195 | ||||
| CBN28421 | 6158 | 4673 | ||||
| CBN28994 | 156045 | 145354 | ||||
| CBN28994:np211 | 156045 | 145354 | ||||
| CBN29205 | 181625 | 179699 | ||||
| CBN29312 | 64716 | 56399 | ||||
| CBN29345:np209 | 189561 | 185862 | ||||
| CBN30313 | 4421 | 1582 | ||||
| CBN30348 | 131912 | 128061 | ||||
| CBN30613 | 161201 | 160837 | ||||
| CBN30809 | 70050 | 68781 | ||||
| CBN30896 | 184820 | 183691 | ||||
| CBN31744 | 193285 | 185862 | ||||
| CBN31744:np203 | 192850 | 190132 | ||||
| CBN31744:np209 | 192851 | 190133 | ||||
| CBN31891 | 176390 | 174809 | ||||
| GBG_brenneri_F13C5.3a | 161288 | 158097 | ||||
| GBG_brenneri_F57C12.5b | 156045 | 145354 | ||||
| GBG_brenneri_ZK1193.5a | 84522 | 79104 | ||||
| GBG_brenneri_R57.1c | 65400 | 56399 | ||||
| GBG_brenneri_F38G1.3 | 113007 | 111680 | ||||
| GBG_brenneri_M02E1.2 | 55083 | 56218 | ||||
| GBG_brenneri_F52D1.3c | 105388 | 96530 | ||||
| GBG_brenneri_M6.1d | 189561 | 185862 | ||||
| GBG_brenneri_M6.4 | 176414 | 175176 | ||||
| GBG_brenneri_F52D1.3b | 105388 | 96530 | ||||
| GBG_brenneri_F13C5.3b | 161288 | 161030 | ||||
| GBG_brenneri_B0310.2a | 131570 | 128061 | ||||
| GBG_brenneri_ZK1193.5e | 84522 | 79104 | ||||
| GBG_brenneri_F57C12.5e | 156045 | 145354 | ||||
| GBG_brenneri_M6.1a | 193288 | 187744 | ||||
| GBG_brenneri_R57.1b | 65400 | 60944 | ||||
| GBG_brenneri_B0310.2b | 131570 | 128061 | ||||
| GBG_brenneri_F38G1.2 | 121563 | 122250 | ||||
| GBG_brenneri_M6.3 | 181767 | 179699 | ||||
| GBG_brenneri_R57.2 | 70852 | 68781 | ||||
| GBG_brenneri_F57C12.5d | 156045 | 145354 | ||||
| GBG_brenneri_B0310.1b | 124996 | 125760 | ||||
| GBG_brenneri_ZK1193.5d | 80680 | 79104 | ||||
| GBG_brenneri_F13C5.6b | 173241 | 169478 | ||||
| GBG_brenneri_R57.1a | 65430 | 56399 | ||||
| GBG_brenneri_F57C12.5c | 156045 | 145354 | ||||
| GBG_brenneri_ZK1193.5c | 80680 | 79104 | ||||
| GBG_brenneri_B0310.1a | 124996 | 125760 | ||||
| GBG_brenneri_M6.1b | 193288 | 185862 | ||||
| GBG_brenneri_F57C12.5a | 156045 | 145354 | ||||
| GBG_brenneri_M6.1c | 193288 | 190132 | ||||
| GBG_brenneri_F52D1.3a | 105388 | 96530 | ||||
| GBG_brenneri_F13C5.5 | 163140 | 161838 | ||||
| GBG_brenneri_F13C5.6a | 173241 | 169478 | ||||
| GBG_brenneri_F52D1.1 | 107291 | 111271 | ||||
| GBG_brenneri_F57C12.1 | 140813 | 144873 | ||||
| GBG_brenneri_F28C10.3 | 139193 | 134105 | ||||
| GBG_brenneri_R04A9.4 | 75467 | 72534 | ||||
| Transcript | CBN18681.1 | 107291 | 111271 | |||
| CBN12892.1 | 141287 | 144873 | ||||
| CBN31744.1 | 193285 | 185641 | ||||
| CBN30896.1 | 184820 | 183691 | ||||
| CBN29205.1 | 181625 | 179699 | ||||
| CBN31891.1 | 176390 | 174809 | ||||
| CBN15468.1 | 173241 | 169478 | ||||
| CBN10536.1 | 163140 | 161838 | ||||
| CBN30613.1 | 161201 | 160837 | ||||
| CBN02904.1 | 160417 | 158097 | ||||
| CBN28994.1 | 156045 | 145354 | ||||
| CBN21266.1 | 139001 | 134952 | ||||
| CBN30348.1 | 131912 | 128061 | ||||
| CBN12501.1 | 113007 | 111680 | ||||
| CBN03906.1 | 105388 | 96530 | ||||
| CBN00923.1 | 84522 | 79104 | ||||
| CBN09035.1 | 75469 | 72534 | ||||
| CBN30809.1 | 70050 | 68781 | ||||
| CBN29312.1 | 64716 | 56399 | ||||
| CBN28421.1 | 6158 | 4673 | ||||
| CBN30313.1 | 4421 | 1582 | ||||
| Feature_object | WBsf#Cbre_Contig254#70866#-#SL1 | 70866 | 70865 | |||
| WBsf#Cbre_Contig254#75468#-#SL1 | 75468 | 75467 | ||||
| WBsf#Cbre_Contig254#79706#-#SL1 | 79706 | 79705 | ||||
| WBsf#Cbre_Contig254#80772#-#SL1 | 80772 | 80771 | ||||
| WBsf#Cbre_Contig254#84529#-#SL1 | 84529 | 84528 | ||||
| WBsf#Cbre_Contig254#107287#+#SL1 | 107287 | 107288 | ||||
| WBsf#Cbre_Contig254#113008#-#SL1 | 113008 | 113007 | ||||
| WBsf#Cbre_Contig254#129017#-#SL1 | 129017 | 129016 | ||||
| WBsf#Cbre_Contig254#131571#-#SL1 | 131571 | 131570 | ||||
| WBsf#Cbre_Contig254#139012#-#SL1 | 139012 | 139011 | ||||
| WBsf#Cbre_Contig254#156100#-#SL1 | 156100 | 156099 | ||||
| WBsf#Cbre_Contig254#163148#-#SL1 | 163148 | 163147 | ||||
| WBsf#Cbre_Contig254#173254#-#SL1 | 173254 | 173253 | ||||
| WBsf#Cbre_Contig254#192851#-#SL1 | 192851 | 192850 | ||||
| Feature_data | Cbre_Contig254:Dust | 1 | 193288 | |||
| Cbre_Contig254:RNASeq_polyA:1 | ||||||
| Cbre_Contig254:RNASeq_SL1:1 | ||||||
| Cbre_Contig254:RNASeq_SL2:1 | ||||||
| Confirmed_intron_EST:Cbre_Contig254_2 | 150001 | 193288 | ||||
| Confirmed_intron_EST:Cbre_Contig254_1 | 1 | 150000 | ||||
| Cbre_Contig254:TRF | 1 | 193288 | ||||
| Cbre_Contig254:inverted | 1 | 196510 | ||||
| Cbre_Contig254:Confirmed_intron_RNASeq:1 | 1 | 193288 | ||||
| Cbre_Contig254:RNASeq:1 | 1 | 193288 | ||||
| Cbre_Contig254:RNASeq_stranded_reads:1 | 1 | 193288 | ||||
| Cbre_Contig254:RNASeq_forward_reads:1 | 1 | 193288 | ||||
| Cbre_Contig254:RNASeq_reverse_reads:1 | 1 | 193288 | ||||
| Homol_data | Oligo_set:Cbre_Contig254:AGILENT | 1 | 193288 | |||
| BLAT_mRNA:Cbre_Contig254_1 | 1 | 150000 | ||||
| BLAT_mRNA:Cbre_Contig254_2 | 150001 | 193288 | ||||
| BLAT_EST:Cbre_Contig254_1 | 1 | 150000 | ||||
| BLAT_EST:Cbre_Contig254_2 | 150001 | 193288 | ||||
| BLAT_Trinity:Cbre_Contig254 | 1 | 193288 | ||||
| BLAT_Trinity:Cbre_Contig254_1 | 1 | 150000 | ||||
| BLAT_Trinity:Cbre_Contig254_2 | 150001 | 193288 | ||||
| BLAT_EST:Cbre_Contig254 | 1 | 193288 | ||||
| BLAT_mRNA:Cbre_Contig254 | 1 | 193288 | ||||
| BLAT_OST:Cbre_Contig254_1 | 1 | 150000 | ||||
| BLAT_OST:Cbre_Contig254_2 | 150001 | 193288 | ||||
| BLAT_RST:Cbre_Contig254_1 | 1 | 150000 | ||||
| BLAT_RST:Cbre_Contig254_2 | 150001 | 193288 | ||||
| BLAT_IsoSeq:Cbre_Contig254 | 1 | 193288 | ||||
| BLAT_IsoSeq:Cbre_Contig254_1 | 1 | 150000 | ||||
| BLAT_IsoSeq:Cbre_Contig254_2 | 150001 | 193288 | ||||
| Cbre_Contig254:wublastx_brenneri | 1 | 193288 | ||||
| Cbre_Contig254:wublastx_briggsae | 1 | 193288 | ||||
| Cbre_Contig254:wublastx_brugia | 1 | 193288 | ||||
| Cbre_Contig254:wublastx_fly | 1 | 193288 | ||||
| Cbre_Contig254:wublastx_human | 1 | 193288 | ||||
| Cbre_Contig254:wublastx_japonica | 1 | 193288 | ||||
| Cbre_Contig254:wublastx_ovolvulus | 1 | 193288 | ||||
| Cbre_Contig254:wublastx_pristionchus | 1 | 193288 | ||||
| Cbre_Contig254:wublastx_remanei | 1 | 193288 | ||||
| Cbre_Contig254:wublastx_slimSwissProt | 1 | 193288 | ||||
| Cbre_Contig254:wublastx_sratti | 1 | 193288 | ||||
| Cbre_Contig254:wublastx_tmuris | 1 | 193288 | ||||
| Cbre_Contig254:wublastx_worm | 1 | 193288 | ||||
| Cbre_Contig254:wublastx_yeast | 1 | 193288 | ||||
| Cbre_Contig254:RepeatMasker | 1 | 193288 | ||||
| DB_info | Database | GenBank | GL_ID | Scfld02_254 | ||
| GL_AC | GL380040 | |||||
| DB_remark | [100920] Sequence correction: Deletion -470 bases @ 163515 | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis brenneri | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 85e2f85d5674876feeaf93994c380c5e | ||||
| Method | Genomic_canonical |
