WormBase Tree Display for Sequence: C47D2
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| C47D2 | DNA | C47D2 | 17382 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00000391 | 10590 | 8189 | |
| WBGene00200208 | 962 | 845 | ||||
| WBGene00198492 | 3320 | 3542 | ||||
| WBGene00200050 | 845 | 962 | ||||
| WBGene00016738 | 14506 | 15112 | ||||
| CDS_child (57) | ||||||
| Transcript | C47D2.3 | 3320 | 3542 | |||
| C47D2.4 | 845 | 962 | ||||
| C47D2.5 | 962 | 845 | ||||
| C47D2.1.1 | 14506 | 15112 | ||||
| C47D2.2.1 | 10590 | 8189 | ||||
| PCR_product | cenix:107-g5 | 14031 | 15028 | |||
| cenix:128-g12 | 8283 | 9922 | ||||
| mv_C47D2.1 | 14520 | 14966 | ||||
| mv_C47D2.2 | 8263 | 10235 | ||||
| p_C47D2.1_93 | 12519 | 14518 | ||||
| sjj_C47D2.1 | 14416 | 15511 | ||||
| sjj_C47D2.2 | 8165 | 10378 | ||||
| Allele (349) | ||||||
| Oligo_set | Aff_C47D2.1 | 14518 | 14967 | |||
| Aff_C47D2.2 | 10235 | 8260 | ||||
| Feature_object (140) | ||||||
| Feature_data | C47D2:Polysome | 1 | 17382 | |||
| C47D2:TranscriptionallyActiveRegion | 1 | 17382 | ||||
| C47D2:ChIPSeqTF | 1 | 17382 | ||||
| C47D2:TRF | 1 | 17382 | ||||
| C47D2:Dust | 1 | 17382 | ||||
| C47D2:inverted | 1 | 17382 | ||||
| Homol_data (15) | ||||||
| Structure | From | Source | CHROMOSOME_X | |||
| Overlap_right | K02A6 | 17183 | ||||
| Overlap_left | C17H11 | |||||
| Clone_left_end | C47D2 | 1 | ||||
| K02A6 | 17183 | |||||
| Clone_right_end | C17H11 | 6242 | ||||
| DB_info | Database | EMBL | NDB_AC | FO080596 | ||
| NDB_ID | _U64861 | |||||
| NDB_SV | FO080596.2 | |||||
| Secondary_accession | U64861 | |||||
| DB_remark | The 5' clone is C17H11, 200 bp overlap; the 3' clone is K02A6, 200 bp overlap. Actual start of this clone is at base position 1 of C47D2; actual end is at 10307 of M60. | |||||
| [121025] Sequence correction WBsf268637 : Insertion T1 bases from @ 6945 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Johnson D | ||||
| Wilson RK | ||||||
| From_laboratory | RW | |||||
| Date | 14 Mar 1996 00:00:00 | |||||
| 15 Mar 1996 00:00:00 | ||||||
| Date_directory | 960307 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | C47D2 | ||||
| Reference | WBPaper00015325 | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 64689b384cc52a3ffbb7dcc267492295 | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 14 Mar 1996 00:00:00 | |||||
| Map | Sequence-X | |||||
| Interpolated_map_position | X | -0.351241 | ||||
| Method | Genomic_canonical |
