WormBase Tree Display for Sequence: Y45F3A

Y45F3A DNA: Y45F3A 36654
  SMap: S_child: Gene_child: WBGene00012860 6927 12272
        WBGene00014898 27076 28375
        WBGene00004282 1265 6272
        WBGene00012863 33498 30534
        WBGene00012864 35835 33393
        WBGene00012862 27012 26517
        WBGene00012861 16089 13114
      CDS_child (204)
      Transcript: Y45F3A.2.1 3695 6271
        Y45F3A.2.2 1265 6272
        Y45F3A.3a.1 6927 12272
        Y45F3A.3b.1 7260 12270
        Y45F3A.4.1 16089 13114
        Y45F3A.5.1 27012 26517
        Y45F3A.8.1 33498 30534
        Y45F3A.9.1 35835 33393
      Pseudogene: Y45F3A.6 27076 28375
        Y45F3A.7:wp217 29382 28545
      Nongenomic: yk268f11 8593 8639
      PCR_product (32)
      Allele (650)
      Oligo_set: Aff_Y39A1A.3 37041 36027
        Aff_Y45F3A.2 3761 5950
        Aff_Y45F3A.3 11024 12218
        Aff_Y45F3A.4 16039 13457
        Aff_Y45F3A.5 27012 26559
        Aff_Y45F3A.8 31997 30612
        Aff_Y45F3A.9 34848 33591
      Feature_object (238)
      Feature_data: Y45F3A:Polysome 1 36654
        Y45F3A:TranscriptionallyActiveRegion 1 36654
        Y45F3A:ChIPSeqTF 1 36654
        Y45F3A:TRF 1 36654
        Y45F3A:Dust 1 36654
        Y45F3A:inverted 1 36654
      Homol_data (22)
  Structure: From: Source: CHROMOSOME_III
    Overlap_right: Y39A1A 36549
    Overlap_left: T21C12
    Clone_left_end: Y39A1 36549
      Y45F3A 1
    Clone_right_end: T21C12 133
      Y45F3A 36654
  DB_info: Database: EMBL NDB_AC AL032621
        NDB_SV AL032621.1
    Secondary_accession: Z98864
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Steward CA
    From_laboratory: HX
    Date_directory: 980630
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: Y45F3A
  Properties: Genomic_canonical
    Checksum: MD5: f0ba18eed87abc18ef7fde1d3459b295
    Status: Finished: 30 Jun 1998 00:00:00
      Submitted: 29 Oct 1998 00:00:00
      Annotated: 01 Jan 1980 00:00:00
  Map: Sequence-III Ends: Left: 5482
        Right: 5502
  Interpolated_map_position: III 3.74354
  Assembly_tags: Clone right end 101 106 T21C12
    oligo 4584 4600 serial#=Y45F3.9 sequence=GTAAATCGACATCAGCG flags=
      6934 6916 serial#=Y45F3.5 template=sr58a3 sequence=GGAGTAATCTGTATAATGG flags=
      9065 9048 serial#=Y45F3.6 template= sequence=ATCTCTTAGCGAAAACTG flags=
      9462 9446 serial#=Y45F3.3 template=sr59f1.p1U sequence=TTCCGTAGAGGTTTAGG flags=
    Finished Right 36649 36654 Y45F3A
    Clone left end 36549 36554 Y39A1
    Finished Left 1 6 Y45F3A
    annotation 7732 8121 First select a Feature - [ ] Unsure [X] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [X] Single clone region [ ] Forced join [ ] Other Add a comment here - Sonicated pUC clones from sr66e5
      8205 8525 First select a Feature - [ ] Unsure [X] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [X] Single clone region [ ] Forced join [ ] Other Add a comment here - Sonicated pUC clones from sr66e5
      8688 8771 First select a Feature - [ ] Unsure [X] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [X] Single clone region [ ] Forced join [ ] Other Add a comment here - Sonicated pUC clones from sr59f1
      9070 9160 First select a Feature - [ ] Unsure [X] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [X] Single clone region [ ] Forced join [ ] Other Add a comment here - Sonicated pUC clones from sr59f1
  Method: Genomic_canonical