WormBase Tree Display for Gene: WBGene00012861
expand all nodes | collapse all nodes | view schema
| WBGene00012861 | SMap | S_parent | Sequence | Y45F3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y45F3A.4 | |||||||
| Molecular_name | Y45F3A.4 | ||||||||
| Y45F3A.4.1 | |||||||||
| CE33226 | |||||||||
| Other_name | CELE_Y45F3A.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y45F3A.4 | ||||||||
| DB_info | Database | AceView | gene | 3L660 | |||||
| WormQTL | gene | WBGene00012861 | |||||||
| WormFlux | gene | WBGene00012861 | |||||||
| NDB | locus_tag | CELE_Y45F3A.4 | |||||||
| NCBI | gene | 189908 | |||||||
| RefSeq | protein | NM_066929.8 | |||||||
| TREEFAM | TREEFAM_ID | TF321004 | |||||||
| TrEMBL | UniProtAcc | Q9XWZ1 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XWZ1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (46) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (24) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including accessory cell; head mesodermal cell; hyp3; interfacial epithelial cell; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-12; and sek-1 based on microarray; RNA-seq; and tiling array studies. Is affected by eight chemicals including stavudine; Zidovudine; and antimycin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y45F3A.4 | |||||||
| Corresponding_CDS_history | Y45F3A.4:wp93 | ||||||||
| Corresponding_transcript | Y45F3A.4.1 | ||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf651464 | ||||||||
| WBsf717982 | |||||||||
| WBsf994078 | |||||||||
| WBsf994079 | |||||||||
| WBsf1015818 | |||||||||
| WBsf1015819 | |||||||||
| WBsf227473 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056614 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00115879 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00115795 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037105 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006745 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020613 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014340 | ||||||||
| Expr1160078 | |||||||||
| Expr2007555 | |||||||||
| Expr2025791 | |||||||||
| Drives_construct | WBCnstr00029811 | ||||||||
| Construct_product | WBCnstr00029811 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (159) | |||||||||
| Interaction | WBInteraction000425177 | ||||||||
| WBInteraction000461336 | |||||||||
| Map_info | Positive | Positive_clone | Y45F3A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 3.73066 | |||||||
| Reference | WBPaper00027557 | ||||||||
| Method | Gene |
